Pairwise Alignments

Query, 438 a.a., outer membrane protein TolC from Vibrio cholerae E7946 ATCC 55056

Subject, 511 a.a., TolC family outer membrane protein from Brevundimonas sp. GW460-12-10-14-LB2

 Score =  137 bits (345), Expect = 8e-37
 Identities = 120/435 (27%), Positives = 187/435 (42%), Gaps = 28/435 (6%)

Query: 9   VSAALGTLSSAVWAENLAEIYNQAKENDPQLLSVAAQRDAAFEAVTSSRSALLPQINLTA 68
           V A +  L +  WAE L +    A   +P LL+  A + A  E V  +RS L P I  +A
Sbjct: 13  VVAVMTGLGAPAWAETLQDAIALAYRTNPNLLAQRANQRALDETVVQARSGLRPTIGASA 72

Query: 69  GYNINRSD---------------------QAPRESDLLSAGINFSQELYQRSSWV-SLDT 106
           G +  RSD                      +  E++  + G++ SQ ++       ++D 
Sbjct: 73  GVDYTRSDFPAVTQFVDTNGDGIPDTQVKTSSSETEGANVGVSVSQNVWTAGRTSRAIDQ 132

Query: 107 AEKKARQADSQYAATQQGLILRVAKAYFEVLRAQDNLEFVRAEKAAVGRQLEQTKQRFEV 166
           A              +Q ++L V +AY  V R  + L   +     + RQLE+T  RFEV
Sbjct: 133 ARASVLAGRENLREIEQSVMLSVIQAYVNVTRDMEILRIRQENLTVLQRQLEETSARFEV 192

Query: 167 GLSAITDVHDAQAQFDGVLADEVLAENSLTNSYEALREITGQEYSKLAVLDTKRFAASRT 226
           G    TDV  A+A      AD   A+  L+ S  A   + GQ  + L             
Sbjct: 193 GEITRTDVAQAEASQAQSEADLANAQAQLSTSRAAYAAVVGQSPADLEAAPV----LPEV 248

Query: 227 TESSEALIEKAQQQNLSLLAARISQDVARDNISLASSGHLPSLTLDGGYNYGNNSNDNAK 286
               +  IE A Q+N ++LAA      A   ++ A S +LPS+      +YG ++ND   
Sbjct: 249 PSDFDVAIETALQRNPAVLAATYQLQSAEAAVAAARSEYLPSVRATA--SYGGSTNDLGD 306

Query: 287 NTSGEEYNDFKIGVNLKVPLYTGGNTTSLTKQAEFAYVAASQDLEAAYRSVVKDVRAYNN 346
                +   F  G  L VPL+TGG   S   QA     AA   +E   R+V+++V +   
Sbjct: 307 LGELADRRSFTAGATLSVPLFTGGLNRSRVAQALERANAAQIGIEGERRTVLQNVSSAYA 366

Query: 347 NINASIGALRAYEQAVISAKSALEATEAGFDVGTRTIVDVLDATRRLYDANKNLSNARYD 406
            + ++   + A  +AV +A  A E       VG RT +DVL+    L +A  ++++AR  
Sbjct: 367 QVLSTRATVAAGTEAVRAASVAAEGVRQEAQVGLRTTLDVLNQELALRNAQTSVASARAA 426

Query: 407 YILSVLQLRQAIGTL 421
             ++   L  A+G L
Sbjct: 427 EYVARASLLAAMGQL 441