Pairwise Alignments

Query, 438 a.a., outer membrane protein TolC from Vibrio cholerae E7946 ATCC 55056

Subject, 441 a.a., TolC family protein from Phocaeicola dorei CL03T12C01

 Score = 86.3 bits (212), Expect = 2e-21
 Identities = 87/384 (22%), Positives = 163/384 (42%), Gaps = 22/384 (5%)

Query: 51  EAVTSSRSALLPQINLTAGYNINRSDQA---------PRESDLLSAGINFSQELYQRSSW 101
           EA   + + L P+ +L   Y+     Q+             +  S G++ S  ++  + +
Sbjct: 58  EARREAYAGLFPEASLVGSYSRAIKKQSFAMMGEVIEVGTDNTYSGGLSVSLPVFAPALY 117

Query: 102 VSLDTAEKKARQADSQYAATQQGLILRVAKAYFEVLRAQDNLEFVRAEKAAVGRQLEQTK 161
            S+         A  +  A++  ++ +V KA+F++L AQD+ E +              K
Sbjct: 118 KSISLTSTDVNLAVEKSRASRLDMVNQVTKAFFQLLLAQDSYEVLLKSYKQSEDNYNVVK 177

Query: 162 QRFEVGLSAITDVHDAQAQFDGVLADEVLAENSLTNSYEALREITGQEYS-KLAVL-DTK 219
            ++E G  +  D   A  Q   +    V A N +  +   L+ + G E   K+AV  + K
Sbjct: 178 AKYEQGTVSEYDKISADVQMRSLKPTVVSARNGVNLANLQLKVLMGMESDVKVAVEGNLK 237

Query: 220 RFAASRTTESS----EALIEKAQQQNLSLLAARISQDVARDNISLASSGHLPSLTLDGGY 275
            +  S  T  +    + LI  +  + L L A ++ Q      + L  +  +P+L+    Y
Sbjct: 238 DYEMSMFTRQAMPRPDNLINNSTLKQLELNALQLKQ-----TLKLQYTNFMPTLSASFQY 292

Query: 276 NYGNNSNDNAKNTSGEEYNDFKIGVNLKVPLYTGGNTTSLTKQAEFAYVAASQDLEAAYR 335
            Y  + NDN K    +      IG+NL +PL+ G N T L KQ         ++     R
Sbjct: 293 MY-TSMNDNFKFKEYDWRPYSTIGLNLSIPLFKGSNFTQL-KQTRIQMKQLEENRINTER 350

Query: 336 SVVKDVRAYNNNINASIGALRAYEQAVISAKSALEATEAGFDVGTRTIVDVLDATRRLYD 395
            +     +Y +N+ AS   + + ++AV  A+      E  ++VG  TI+++  +   L +
Sbjct: 351 QLTMQATSYLDNMAASTEQVVSNKEAVFQAEKGRTIAEKRYEVGKGTILELNSSEVALTE 410

Query: 396 ANKNLSNARYDYILSVLQLRQAIG 419
           A    + + YDY+++   L   +G
Sbjct: 411 AQLTYNQSIYDYLVAKADLDLVLG 434