Pairwise Alignments

Query, 438 a.a., outer membrane protein TolC from Vibrio cholerae E7946 ATCC 55056

Subject, 474 a.a., Outer membrane protein TolC from Azospirillum sp. SherDot2

 Score = 85.9 bits (211), Expect = 2e-21
 Identities = 93/432 (21%), Positives = 180/432 (41%), Gaps = 19/432 (4%)

Query: 4   LLPLFVSAALGTLSSAVWAENLAEIYNQAKENDPQLLSVAAQRDAAFEAVTSSRSALLPQ 63
           LLPL    A   L+S    E++  +  +  E   +L    A  ++A  A+  S     P 
Sbjct: 11  LLPLIAWGAQPVLASP--REDVVSLIGKVTETHDRLRGAEAAAESARNALRISHGGWYPT 68

Query: 64  INLTAGYNINRSDQAPRESDLLSAGINFSQELYQRSSWV--------SLDTAEKKARQAD 115
           ++L+A       +   + + L +  +N  Q   + +  +         +  A+    +AD
Sbjct: 69  LSLSAN---GGRETTNKPAGLPNTDLNAKQLSVRATQLIWDFDATNADIRRAQVSVVRAD 125

Query: 116 SQYAATQQGLILRVAKAYFEVLRAQDNLEFVRAEKAAVGRQLEQTKQRFEVGLSAITDVH 175
                T+Q L++    AY  ++RA   L F R  +  + RQ    + R + G    TDV 
Sbjct: 126 IAVERTRQELLVEGLSAYATLVRAHRLLVFSRQSEDNIRRQTGLEEVRLQEGYGFSTDVL 185

Query: 176 DAQAQFDGVLADEVLAENSLTNSYEALREITGQEYSKLAVLDTKRFAASRTTESSEALIE 235
            A++Q  G  A  V AE ++  +    +   G    +L   +      +    S +A ++
Sbjct: 186 QAKSQLAGAQARRVAAEEAMQTALSRFQAYFGHVPFQLDGAEVLAMTKAALPLSMDAAVD 245

Query: 236 KAQQQNLSLLAARISQDVARDNISLASSGHL-PSLTLDGGYNYGNNSNDNAKNTSGEEYN 294
           +A++ N  L    ++   A++ ++      L P +    GY   N  +D A     ++  
Sbjct: 246 EARRHNPRLQELALTTAAAQEAVASVRGRTLYPRVE---GYVERNIKSDVAGQPGRQDEL 302

Query: 295 DFKIGVNLKVPLYTGGNTTSLTKQAEFAYVAASQDLEAAYRSVVKDVRAYNNNINASIGA 354
            FK+ V     L TG    +  + AE    AA  +     R+V++ VR   N + ++   
Sbjct: 303 LFKLQVTFS--LNTGLTAINSVRLAEADLRAADANWADQERTVLETVRNSWNRLESARSQ 360

Query: 355 LRAYEQAVISAKSALEATEAGFDVGTRTIVDVLDATRRLYDANKNLSNARYDYILSVLQL 414
           ++        A   L+   A  ++G+R+++D+L     L +A  + + A  + +L+  +L
Sbjct: 361 VKLLNDQASLAAGFLDVARAERELGSRSLIDILSGETTLINARSDAAAAETELVLAGYRL 420

Query: 415 RQAIGTLSEQDV 426
             A+G L+  D+
Sbjct: 421 LAAMGRLTAADI 432