Pairwise Alignments

Query, 438 a.a., outer membrane protein TolC from Vibrio cholerae E7946 ATCC 55056

Subject, 457 a.a., Outer membrane protein TolC precursor from Alteromonas macleodii MIT1002

 Score =  382 bits (981), Expect = e-110
 Identities = 211/453 (46%), Positives = 298/453 (65%), Gaps = 20/453 (4%)

Query: 2   KKLLPLFVSAALGTLSSAVWAENLAEIYNQAKENDPQLLSVAAQRDAAFEAVTSSRSALL 61
           + LL L +  ++ T      A++L ++Y QA  NDP +    AQRDAAFE ++ SR+ LL
Sbjct: 3   RTLLSLVIGVSMTT---GALADDLMQVYQQALANDPLVNQAKAQRDAAFEGISISRANLL 59

Query: 62  PQINLTAGYNINRSDQAPR---------------ESDLLSAGINFSQELYQRSSWVSLDT 106
           PQI+ + GY  + +++A                 + D +  G+     LY  ++W+ LD 
Sbjct: 60  PQISGSVGYTTSTAERAQTLGANADDLQIVVFETDVDTIDYGLQVQMSLYDHANWLGLDR 119

Query: 107 AEKKARQADSQYAATQQGLILRVAKAYFEVLRAQDNLEFVRAEKAAVGRQLEQTKQRFEV 166
           AEK A Q+D+Q AA+ Q +I+R   AYF+VLRA+DN+EFV AEK A+ RQLEQT+QRFEV
Sbjct: 120 AEKVAEQSDAQLAASMQDVIVRTVTAYFDVLRARDNVEFVGAEKRAIERQLEQTRQRFEV 179

Query: 167 GLSAITDVHDAQAQFDGVLADEVLAENSLTNSYEALREITGQEYSKLAVLDTKRFAASRT 226
           GL+AITDVH+AQA +D  +A E+ A+N L  + EALR ITG+ + +L  L+T+ FAA+  
Sbjct: 180 GLTAITDVHEAQANYDSTVAQEIQAKNQLEFALEALRVITGKYHDRLFGLNTENFAATMP 239

Query: 227 TESS-EALIEKAQQQNLSLLAARISQDVARDNISLASSGHLPSLTLDGGYNYGNNSNDNA 285
             ++ +  +E AQ +NL+LL  R++ D+A+++IS+A SGHLP+L L    +   +   N 
Sbjct: 240 VPAAVDEWLETAQDKNLALLVDRLAMDIAKEDISIARSGHLPTLGLTANASRSKDDISNP 299

Query: 286 KNTSGEEYNDFK-IGVNLKVPLYTGGNTTSLTKQAEFAYVAASQDLEAAYRSVVKDVRAY 344
                  Y D + + V L VP+Y G   +S T QA+F YVAASQ  E  YR  V+ +R+ 
Sbjct: 300 FLQFETPYLDSQSVAVQLNVPIYQGSRVSSQTDQAKFNYVAASQAAEQTYRQTVQSIRSS 359

Query: 345 NNNINASIGALRAYEQAVISAKSALEATEAGFDVGTRTIVDVLDATRRLYDANKNLSNAR 404
            NN+ ASI  +RA EQ+V+SA SAL+ATEAGFDVGTRTIVDVLD+TR L+DA +NL+ AR
Sbjct: 360 FNNVKASISTIRALEQSVVSADSALKATEAGFDVGTRTIVDVLDSTRNLFDARRNLAGAR 419

Query: 405 YDYILSVLQLRQAIGTLSEQDVMDVNAGLKVAK 437
           YD+I SV+ L+QA GTL+ +DV  +N GLK A+
Sbjct: 420 YDFIQSVVTLKQAAGTLTGEDVAMINRGLKPAE 452