Pairwise Alignments

Query, 626 a.a., DNA topoisomerase IV subunit B from Vibrio cholerae E7946 ATCC 55056

Subject, 635 a.a., DNA topoisomerase IV subunit B from Pseudomonas simiae WCS417

 Score =  915 bits (2364), Expect = 0.0
 Identities = 453/625 (72%), Positives = 521/625 (83%), Gaps = 3/625 (0%)

Query: 5   YNAGAIEVLNGLEPVRRRPGMYTDTTRPNHLGQEVIDNSVDEALAGYASKIQVILHADQS 64
           YNA AIEVL+GL+PVR+RPGMYTDT+RPNHL QEVIDNSVDEALAG+A  + VILHAD S
Sbjct: 9   YNADAIEVLSGLDPVRKRPGMYTDTSRPNHLAQEVIDNSVDEALAGHAKSVHVILHADHS 68

Query: 65  LEVIDDGRGMPVDIHPEEKVSGVELILCKLHAGGKFSNKNYQFSGGLHGVGISVVNALSK 124
           LEV DDGRGMPVDIHPEE V GVELIL KLHAGGKFSNKNYQFSGGLHGVGISVVNALS 
Sbjct: 69  LEVSDDGRGMPVDIHPEEGVPGVELILTKLHAGGKFSNKNYQFSGGLHGVGISVVNALST 128

Query: 125 RVEVAVRRDGQVYEIAFEHGDKVTELTVTGTCGRRNTGTSVHFWPDTKYFDSPNFSVSRL 184
            V V V+RDG  Y++ F  G K T+L V GT G+RNTGTSV+F PD KYFDSP FS+SRL
Sbjct: 129 LVRVKVKRDGNEYQMTFADGYKATDLEVIGTVGKRNTGTSVYFAPDPKYFDSPKFSISRL 188

Query: 185 INNLRAKAVLCPGLEIIFTDKVNNNEHRWLYEDGLKDYLAEGVKGYTLLPEEPFTGEFTA 244
            + L+AKAVLCPGL + F DK    +  W YEDGL+ YL + V  +  LP EPF G    
Sbjct: 189 KHVLKAKAVLCPGLVVTFEDKGTGEKVEWHYEDGLRSYLEDSVSDFERLPNEPFCGSLAG 248

Query: 245 QTEAATWAVIWLPEGGELITESYVNLIPTAQGGTHVNGLRQGLLDAMREFCEFRNLLPRG 304
             EA  WA++WLPEGG+ + ESYVNLIPTAQGGTHVNGLRQGLLDAMREFCE+RNLLPRG
Sbjct: 249 NKEAVDWALLWLPEGGDSVQESYVNLIPTAQGGTHVNGLRQGLLDAMREFCEYRNLLPRG 308

Query: 305 VKLTGEDVFDRCAYVLSIKMQDPQFAGQTKERLSSRQSAAFVSGVVKDAFSLWLNEKPQL 364
           VKL  EDV++R A+VLS+KMQ+PQF+GQTKERLSSR++AAFVSGVVKDAFSLWLNE P+L
Sbjct: 309 VKLAPEDVWERIAFVLSMKMQEPQFSGQTKERLSSREAAAFVSGVVKDAFSLWLNEHPEL 368

Query: 365 AEQLAEVCIANAHSRMRASKKVVRKKIASGPALPGKLTDCTVQDLNRTELFLVEGDSAGG 424
              LAE+ I NA  R++ASKKV RK+I  GPALPGKL DC  QD  R+ELFLVEGDSAGG
Sbjct: 369 GLALAELAINNAGRRLKASKKVERKRITQGPALPGKLADCAGQDPMRSELFLVEGDSAGG 428

Query: 425 SAKQARDREFQAVMPLRGKILNTWEVSADQVLASQEVHDISVALGIDPDSDNLEALRYGK 484
           SAKQARD+EFQA++PLRGKILNTWEV   +VLASQEVH+I+VA+G+DP + ++  LRYGK
Sbjct: 429 SAKQARDKEFQAILPLRGKILNTWEVDGSEVLASQEVHNIAVAIGVDPGAADMSQLRYGK 488

Query: 485 VCILADADSDGLHIATLLCALFTRHFRALVKAGHVYVAMPPLYRIDCGKEVFYALDDQEK 544
           +CILADADSDGLHIATLLCALF +HFR LV+AGHVYVAMPPLYRID GKE++YALD+ E+
Sbjct: 489 ICILADADSDGLHIATLLCALFVQHFRPLVEAGHVYVAMPPLYRIDLGKEIYYALDEAER 548

Query: 545 EGVLERL--SQKKAKVNVQRFKGLGEMNPLQLRETTMDPNTRRLVQLTI-DDAEATDEMM 601
           +G+L+RL   +K+ K  V RFKGLGEMNP QLRETTMDPNTRRLVQLT+ DD  AT EMM
Sbjct: 549 DGILDRLVAEKKRGKPQVTRFKGLGEMNPPQLRETTMDPNTRRLVQLTLGDDFAATSEMM 608

Query: 602 DMLLGKKRADDRRAWLQRNGDMAEV 626
           DMLL KKRA DR++WL+  G++AEV
Sbjct: 609 DMLLAKKRAPDRKSWLESKGNLAEV 633