Pairwise Alignments

Query, 626 a.a., DNA topoisomerase IV subunit B from Vibrio cholerae E7946 ATCC 55056

Subject, 634 a.a., DNA topoisomerase IV subunit B from Pseudomonas putida KT2440

 Score =  926 bits (2393), Expect = 0.0
 Identities = 456/624 (73%), Positives = 525/624 (84%), Gaps = 2/624 (0%)

Query: 5   YNAGAIEVLNGLEPVRRRPGMYTDTTRPNHLGQEVIDNSVDEALAGYASKIQVILHADQS 64
           YNA AIEVL+GL+PVR+RPGMYTDT+RPNHL QEVIDNSVDEALAG+A  +QVILHAD S
Sbjct: 9   YNADAIEVLSGLDPVRKRPGMYTDTSRPNHLAQEVIDNSVDEALAGHARSVQVILHADHS 68

Query: 65  LEVIDDGRGMPVDIHPEEKVSGVELILCKLHAGGKFSNKNYQFSGGLHGVGISVVNALSK 124
           LEV DDGRGMPVDIHPEE VSGVELIL KLHAGGKFSNKNYQFSGGLHGVGISVVNALS 
Sbjct: 69  LEVSDDGRGMPVDIHPEEGVSGVELILTKLHAGGKFSNKNYQFSGGLHGVGISVVNALST 128

Query: 125 RVEVAVRRDGQVYEIAFEHGDKVTELTVTGTCGRRNTGTSVHFWPDTKYFDSPNFSVSRL 184
           +V V V+RDG  Y++ F  G K +EL V G+ G+RNTGTSV+F PD KYFDSP FS+SRL
Sbjct: 129 QVRVRVKRDGNEYQMTFADGFKASELEVVGSVGKRNTGTSVYFSPDPKYFDSPKFSISRL 188

Query: 185 INNLRAKAVLCPGLEIIFTDKVNNNEHRWLYEDGLKDYLAEGVKGYTLLPEEPFTGEFTA 244
            + L+AKAVLCPGL + F DK +  +  W YEDGL+ YL + V  +  LP+EPF G    
Sbjct: 189 KHVLKAKAVLCPGLLVSFEDKASGEKVEWHYEDGLRSYLVDSVNEFQRLPDEPFCGSLAG 248

Query: 245 QTEAATWAVIWLPEGGELITESYVNLIPTAQGGTHVNGLRQGLLDAMREFCEFRNLLPRG 304
             EA  WA++WLPEGG+ I ESYVNLIPTAQGGTHVNGLRQGLLDAMREFCEFRNLLPRG
Sbjct: 249 NKEAVDWALLWLPEGGDSIQESYVNLIPTAQGGTHVNGLRQGLLDAMREFCEFRNLLPRG 308

Query: 305 VKLTGEDVFDRCAYVLSIKMQDPQFAGQTKERLSSRQSAAFVSGVVKDAFSLWLNEKPQL 364
           VKL  EDV++R  +VLS+KMQDPQF+GQTKERLSSR++AAFVSGVVKDAFSLWLN  P+L
Sbjct: 309 VKLAPEDVWERITFVLSMKMQDPQFSGQTKERLSSREAAAFVSGVVKDAFSLWLNAHPEL 368

Query: 365 AEQLAEVCIANAHSRMRASKKVVRKKIASGPALPGKLTDCTVQDLNRTELFLVEGDSAGG 424
             QLAE+ I+NA  R++ASKKV RK+I  GPALPGKL DC  QD  R ELFLVEGDSAGG
Sbjct: 369 GMQLAELAISNAGRRLKASKKVERKRITQGPALPGKLADCAGQDPMRAELFLVEGDSAGG 428

Query: 425 SAKQARDREFQAVMPLRGKILNTWEVSADQVLASQEVHDISVALGIDPDSDNLEALRYGK 484
           SAKQARD+EFQA++PLRGKILNTWEV   +VLASQEVH+I+VA+G+DP + +L  LRYGK
Sbjct: 429 SAKQARDKEFQAILPLRGKILNTWEVDGGEVLASQEVHNIAVAIGVDPGATDLAQLRYGK 488

Query: 485 VCILADADSDGLHIATLLCALFTRHFRALVKAGHVYVAMPPLYRIDCGKEVFYALDDQEK 544
           +CILADADSDGLHIATLLCALF +HFR LV+AGHVYVAMPPLYRID GKE++YALD+ E+
Sbjct: 489 ICILADADSDGLHIATLLCALFVQHFRTLVEAGHVYVAMPPLYRIDLGKEIYYALDEAER 548

Query: 545 EGVLERL--SQKKAKVNVQRFKGLGEMNPLQLRETTMDPNTRRLVQLTIDDAEATDEMMD 602
           +G+L+RL   +K+ K  V RFKGLGEMNP QLRETTMDPNTRRLVQLT+DD EAT E+MD
Sbjct: 549 DGILDRLVAEKKRGKPQVTRFKGLGEMNPPQLRETTMDPNTRRLVQLTLDDVEATCELMD 608

Query: 603 MLLGKKRADDRRAWLQRNGDMAEV 626
            LL KKRA DR++WL+  G++AEV
Sbjct: 609 KLLAKKRAGDRKSWLETKGNLAEV 632