Pairwise Alignments

Query, 626 a.a., DNA topoisomerase IV subunit B from Vibrio cholerae E7946 ATCC 55056

Subject, 652 a.a., DNA gyrase subunit B from Pontibacter actiniarum KMM 6156, DSM 19842

 Score =  423 bits (1088), Expect = e-122
 Identities = 251/646 (38%), Positives = 367/646 (56%), Gaps = 24/646 (3%)

Query: 1   MTEQYNAGAIEVLNGLEPVRRRPGMYTDTTRP---NHLGQEVIDNSVDEALAGYASKIQV 57
           +   Y+A +I+VL GLE VR+RP MY         +HL  EV+DNS+DEALAG+  +I V
Sbjct: 9   LANDYSANSIQVLEGLEAVRKRPAMYIGDIGIKGLHHLVWEVVDNSIDEALAGHCDEINV 68

Query: 58  ILHADQSLEVIDDGRGMPVDIHPEEKVSGVELILCKLHAGGKFSNKNYQFSGGLHGVGIS 117
            ++ D S+ V D+GRG+P D H +E  S +E+++  LHAGGKF    Y+ SGGLHGVG+S
Sbjct: 69  TINEDNSITVSDNGRGIPTDFHQKEGRSALEVVMTVLHAGGKFDKDTYKVSGGLHGVGVS 128

Query: 118 VVNALSKRVEVAVRRDGQVYEIAFEHGDKVTELTVTGTCGRRNTGTSVHFWPDTKYFDSP 177
            VNALS  + V V R G++YE  +  G     +   G   R  TGT+V F PD   F + 
Sbjct: 129 CVNALSTDLHVTVHRKGKIYEQHYNIGVPQYPVREIGETDR--TGTTVQFKPDASIFTAT 186

Query: 178 NFSVSRLINNLRAKAVLCPGLEIIFTDKVNNNEH------RWLYEDGLKDYLAEGVKGYT 231
            +    + + LR  + L  G+ I   D    N+        +L E GLK+++    +   
Sbjct: 187 EYKFDTIASRLRELSFLNKGIRINLKDLRELNDQGEPLNDSFLSEGGLKEFVTYLDETRE 246

Query: 232 LLPEEPFTGEFTAQTEAATWAVIWLPEGGELITESYVNLIPTAQGGTHVNGLRQGLLDAM 291
            L  EP   E          A+ +     E I  SYVN I T +GGTHV G R+ L   +
Sbjct: 247 NLIPEPIHVESEKNGVPVEIALQYNTSYSENIF-SYVNNINTIEGGTHVAGFRRALTRTL 305

Query: 292 REFCEFRNLLPR-GVKLTGEDVFDRCAYVLSIKMQDPQFAGQTKERLSSRQSAAFVSGVV 350
           + + E   +L +  V + G+D  +    V+S+K+ +PQF GQTK +L + + +  V   V
Sbjct: 306 KAYAEKSGMLDKVKVDIAGDDFREGLTAVISVKVAEPQFEGQTKTKLGNSEVSGAVDTAV 365

Query: 351 KDAFSLWLNEKPQLAEQLAEVCIANA---HSRMRASKKVVRKKIASGPALPGKLTDCTVQ 407
            +  + +L E P+ A  +    I  A   H+  +A + V RK + S  +LPGKL DC+  
Sbjct: 366 GEMLNQYLEENPKEARTIVNKVIIAAQARHAARKAREMVQRKNVLSSTSLPGKLADCSDN 425

Query: 408 DLNRTELFLVEGDSAGGSAKQARDREFQAVMPLRGKILNTWEVSADQVLASQEVHDISVA 467
           +    E++LVEGDSAGGSAKQ RDR+FQA++PLRGKILN  +    ++  S E+ ++  A
Sbjct: 426 NPENCEIYLVEGDSAGGSAKQGRDRKFQAILPLRGKILNVEKAQEHRIYESDEIKNMITA 485

Query: 468 LGI------DPDSDNLEALRYGKVCILADADSDGLHIATLLCALFTRHFRALVKAGHVYV 521
           LG+      D  + N++ LRY K+ I+ DAD DG HI TL+   F R+ + L++ G+VY+
Sbjct: 486 LGVSFGTQEDEKALNMDKLRYHKIIIMTDADVDGSHIRTLILTFFFRYMKELIEKGYVYI 545

Query: 522 AMPPLYRIDCGKEVFYALDDQEK-EGVLERLSQKKAKVNVQRFKGLGEMNPLQLRETTMD 580
           A+PPLY +  GKE  Y   +Q++ + + E    ++  V VQR+KGLGEMNP QL  TTMD
Sbjct: 546 ALPPLYLVKKGKEERYCWSEQDRIDAIAEIGKGREESVGVQRYKGLGEMNPEQLWNTTMD 605

Query: 581 PNTRRLVQLTIDDAEATDEMMDMLLGKKRADDRRAWLQRNGDMAEV 626
           P +R L ++ I+ A   D +  ML+G + A  RR +++RN   A V
Sbjct: 606 PTSRSLKRVDIESAAEADHLFSMLMGDEVA-PRRDFIERNAKYARV 650