Pairwise Alignments

Query, 626 a.a., DNA topoisomerase IV subunit B from Vibrio cholerae E7946 ATCC 55056

Subject, 631 a.a., DNA topoisomerase 4 subunit B from Erwinia amylovora T8

 Score = 1002 bits (2590), Expect = 0.0
 Identities = 488/624 (78%), Positives = 548/624 (87%), Gaps = 2/624 (0%)

Query: 5   YNAGAIEVLNGLEPVRRRPGMYTDTTRPNHLGQEVIDNSVDEALAGYASKIQVILHADQS 64
           YNA +IEVL+GLEPVRRRPGMYTDT RPNHLGQEVIDNSVDEALAG+A +++VILH DQS
Sbjct: 6   YNADSIEVLSGLEPVRRRPGMYTDTARPNHLGQEVIDNSVDEALAGHAKRVEVILHPDQS 65

Query: 65  LEVIDDGRGMPVDIHPEEKVSGVELILCKLHAGGKFSNKNYQFSGGLHGVGISVVNALSK 124
           LEVIDDGRGMPVDIHPEE V  VELI C+LHAGGKFSNKNYQFSGGLHGVGISVVNALSK
Sbjct: 66  LEVIDDGRGMPVDIHPEEGVPAVELIFCRLHAGGKFSNKNYQFSGGLHGVGISVVNALSK 125

Query: 125 RVEVAVRRDGQVYEIAFEHGDKVTELTVTGTCGRRNTGTSVHFWPDTKYFDSPNFSVSRL 184
           RVEV VRR+ +VYE+AFE+GDKV +LTVTGT  +RNTGT V FWPD  +FDSP FSVSRL
Sbjct: 126 RVEVTVRRNAEVYEMAFENGDKVQDLTVTGTVAKRNTGTRVQFWPDESFFDSPRFSVSRL 185

Query: 185 INNLRAKAVLCPGLEIIFTDKVNNNEHRWLYEDGLKDYLAEGVKGYTLLPEEPFTGEFTA 244
            + L+AKAVLCPG+EI+F D++N  E  W Y DGL DYL E V G  LLPE+PF G F+ 
Sbjct: 186 SHLLKAKAVLCPGVEIVFKDQLNKTEQSWCYADGLTDYLMEAVNGLPLLPEKPFVGAFSG 245

Query: 245 QTEAATWAVIWLPEGGELITESYVNLIPTAQGGTHVNGLRQGLLDAMREFCEFRNLLPRG 304
             EA  WA++WLPEGGEL+TESYVNLIPT QGGTHVNGLRQGLLDAMREFCE+RN+LPRG
Sbjct: 246 DVEAVDWALLWLPEGGELLTESYVNLIPTMQGGTHVNGLRQGLLDAMREFCEYRNILPRG 305

Query: 305 VKLTGEDVFDRCAYVLSIKMQDPQFAGQTKERLSSRQSAAFVSGVVKDAFSLWLNEKPQL 364
           VKL+ ED++DRCAYVLS+KMQDPQFAGQTKERLSSRQ AAFVSGVVKDAFSLWLN+  Q 
Sbjct: 306 VKLSAEDIWDRCAYVLSVKMQDPQFAGQTKERLSSRQCAAFVSGVVKDAFSLWLNQNVQA 365

Query: 365 AEQLAEVCIANAHSRMRASKKVVRKKIASGPALPGKLTDCTVQDLNRTELFLVEGDSAGG 424
           AE LAE+ I++A  RMRA+KKVVRKK+ SGPALPGKL DC+ QDL+RTELFLVEGDSAGG
Sbjct: 366 AEMLAELAISSAQRRMRAAKKVVRKKLTSGPALPGKLADCSAQDLSRTELFLVEGDSAGG 425

Query: 425 SAKQARDREFQAVMPLRGKILNTWEVSADQVLASQEVHDISVALGIDPDSDNLEALRYGK 484
           SAKQARDRE+QA+MPL+GKILNTWEVS+D+VLASQEVHDISVA+GIDPDS++L  LRYGK
Sbjct: 426 SAKQARDREYQAIMPLKGKILNTWEVSSDEVLASQEVHDISVAIGIDPDSEDLSQLRYGK 485

Query: 485 VCILADADSDGLHIATLLCALFTRHFRALVKAGHVYVAMPPLYRIDCGKEVFYALDDQEK 544
           +CILADADSDGLHIATLLCALF RHFR LVK GHVYVAMPPLYRID GKEV+YALD++EK
Sbjct: 486 ICILADADSDGLHIATLLCALFVRHFRTLVKNGHVYVAMPPLYRIDLGKEVYYALDEEEK 545

Query: 545 EGVLERLSQKKAKVNVQRFKGLGEMNPLQLRETTMDPNTRRLVQLTI--DDAEATDEMMD 602
            G+LE+L +KK K  VQRFKGLGEMNPLQLRETT+DPNTRRLVQLTI  +D   T  +MD
Sbjct: 546 AGILEQLKRKKGKPGVQRFKGLGEMNPLQLRETTLDPNTRRLVQLTISDEDVNQTLAVMD 605

Query: 603 MLLGKKRADDRRAWLQRNGDMAEV 626
           MLL KKR++DRR WLQ  GD AE+
Sbjct: 606 MLLAKKRSEDRRNWLQEKGDSAEI 629