Pairwise Alignments

Query, 626 a.a., DNA topoisomerase IV subunit B from Vibrio cholerae E7946 ATCC 55056

Subject, 630 a.a., DNA topoisomerase IV, B subunit, proteobacterial from Enterobacter asburiae PDN3

 Score = 1024 bits (2647), Expect = 0.0
 Identities = 498/628 (79%), Positives = 555/628 (88%), Gaps = 2/628 (0%)

Query: 1   MTEQYNAGAIEVLNGLEPVRRRPGMYTDTTRPNHLGQEVIDNSVDEALAGYASKIQVILH 60
           MT+ YNA AIEVL GLEPVRRRPGMYTDTTRPNHLGQEVIDNSVDEALAG+A ++ VILH
Sbjct: 1   MTQTYNADAIEVLTGLEPVRRRPGMYTDTTRPNHLGQEVIDNSVDEALAGHAKRVDVILH 60

Query: 61  ADQSLEVIDDGRGMPVDIHPEEKVSGVELILCKLHAGGKFSNKNYQFSGGLHGVGISVVN 120
           ADQSLEVIDDGRGMPVDIHPEE V  VELILC+LHAGGKFSNKNYQFSGGLHGVGISVVN
Sbjct: 61  ADQSLEVIDDGRGMPVDIHPEEGVPAVELILCRLHAGGKFSNKNYQFSGGLHGVGISVVN 120

Query: 121 ALSKRVEVAVRRDGQVYEIAFEHGDKVTELTVTGTCGRRNTGTSVHFWPDTKYFDSPNFS 180
           ALSKRVEV VRRDGQVY IAFE+GDKV +L V GTCG+RNTGTSVHFWPD  +FDSP FS
Sbjct: 121 ALSKRVEVNVRRDGQVYNIAFENGDKVQDLQVVGTCGKRNTGTSVHFWPDESFFDSPRFS 180

Query: 181 VSRLINNLRAKAVLCPGLEIIFTDKVNNNEHRWLYEDGLKDYLAEGVKGYTLLPEEPFTG 240
           VSRL + L+AKAVLCPG+EI FTD VNN    W Y DGL DYL E V G   LPE+PF G
Sbjct: 181 VSRLTHLLKAKAVLCPGVEITFTDHVNNTAQTWCYADGLNDYLCEAVNGLPTLPEKPFVG 240

Query: 241 EFTAQTEAATWAVIWLPEGGELITESYVNLIPTAQGGTHVNGLRQGLLDAMREFCEFRNL 300
            F+  TEA  WA++WLPEGGEL+TESYVNLIPT  GGTHVNGLRQGLLDAMREFCE+RN+
Sbjct: 241 NFSGDTEAVDWALLWLPEGGELLTESYVNLIPTMLGGTHVNGLRQGLLDAMREFCEYRNI 300

Query: 301 LPRGVKLTGEDVFDRCAYVLSIKMQDPQFAGQTKERLSSRQSAAFVSGVVKDAFSLWLNE 360
           LPRGVKL+ ED++DRCAYVLS+KMQDPQFAGQTKERLSSRQ AAFVSGVVKDAF+LWLN+
Sbjct: 301 LPRGVKLSAEDIWDRCAYVLSVKMQDPQFAGQTKERLSSRQCAAFVSGVVKDAFTLWLNQ 360

Query: 361 KPQLAEQLAEVCIANAHSRMRASKKVVRKKIASGPALPGKLTDCTVQDLNRTELFLVEGD 420
             Q AE LAE+ I++A  R+RA+KKVVRKK+ SGPALPGKL DCT QDLNRTELFLVEGD
Sbjct: 361 NVQAAEMLAEMAISSAQRRLRAAKKVVRKKLTSGPALPGKLADCTAQDLNRTELFLVEGD 420

Query: 421 SAGGSAKQARDREFQAVMPLRGKILNTWEVSADQVLASQEVHDISVALGIDPDSDNLEAL 480
           SAGGSAKQARDRE+QA+MPL+GKILNTWEVS+D+VLASQEVHDISVA+GIDPDSD+L  L
Sbjct: 421 SAGGSAKQARDREYQAIMPLKGKILNTWEVSSDEVLASQEVHDISVAIGIDPDSDDLSQL 480

Query: 481 RYGKVCILADADSDGLHIATLLCALFTRHFRALVKAGHVYVAMPPLYRIDCGKEVFYALD 540
           RYGK+CILADADSDGLHIATLLCALF +HF+ LVK GHV+VA+PPLYRID GKEV+YAL 
Sbjct: 481 RYGKICILADADSDGLHIATLLCALFVKHFKTLVKNGHVHVALPPLYRIDLGKEVYYALT 540

Query: 541 DQEKEGVLERLSQKKAKVNVQRFKGLGEMNPLQLRETTMDPNTRRLVQLTI--DDAEATD 598
           ++EK GVLE+L +KK K NVQRFKGLGEMNP+QLRETT+DPNTRRLVQLTI  +D + T+
Sbjct: 541 EEEKAGVLEQLKRKKGKPNVQRFKGLGEMNPMQLRETTLDPNTRRLVQLTISDEDEQQTN 600

Query: 599 EMMDMLLGKKRADDRRAWLQRNGDMAEV 626
            MMDMLL KKR++DRR WLQ  GDMA++
Sbjct: 601 AMMDMLLAKKRSEDRRNWLQEKGDMADI 628