Pairwise Alignments

Query, 626 a.a., DNA topoisomerase IV subunit B from Vibrio cholerae E7946 ATCC 55056

Subject, 631 a.a., DNA topoisomerase 4 subunit B from Alteromonas macleodii MIT1002

 Score =  995 bits (2572), Expect = 0.0
 Identities = 483/629 (76%), Positives = 551/629 (87%), Gaps = 3/629 (0%)

Query: 1   MTEQYNAGAIEVLNGLEPVRRRPGMYTDTTRPNHLGQEVIDNSVDEALAGYASKIQVILH 60
           M+ QYN+ AIEVLNGL+PV+RRPGMYTDTTRPNHLGQEVIDNSVDEALAG+AS I+VILH
Sbjct: 1   MSNQYNSDAIEVLNGLDPVKRRPGMYTDTTRPNHLGQEVIDNSVDEALAGHASNIKVILH 60

Query: 61  ADQSLEVIDDGRGMPVDIHPEEKVSGVELILCKLHAGGKFSNKNYQFSGGLHGVGISVVN 120
            DQSLEVIDDGRGMPVDIHPEE +SGVELILCKLHAGGKFSNKNY FSGGLHGVGISVVN
Sbjct: 61  EDQSLEVIDDGRGMPVDIHPEEGISGVELILCKLHAGGKFSNKNYAFSGGLHGVGISVVN 120

Query: 121 ALSKRVEVAVRRDGQVYEIAFEHGDKVTELTVTGTCGRRNTGTSVHFWPDTKYFDSPNFS 180
           ALS RVEV +RRD  VY+IAFE+GDKV +L V  TCG+RNTGT VHFWPD +YFDS  FS
Sbjct: 121 ALSTRVEVTIRRDSNVYQIAFENGDKVEDLQVIDTCGKRNTGTRVHFWPDPQYFDSAKFS 180

Query: 181 VSRLINNLRAKAVLCPGLEIIFTDKVNNNEHRWLYEDGLKDYLAEGVKGYTLLPEE-PFT 239
            SRL++NLRAKAVL PGL I F +K+      W YEDGLKDYL + V+ +  LP + PF 
Sbjct: 181 ASRLVHNLRAKAVLSPGLRIRFDNKITKESQEWYYEDGLKDYLYQAVEEFETLPSDTPFV 240

Query: 240 GEFTAQTEAATWAVIWLPEGGELITESYVNLIPTAQGGTHVNGLRQGLLDAMREFCEFRN 299
           G F+  TEAA WAV+WLPEGG+L+TESYVNLIPTAQGGTHVNGLRQGLL++MREFCEFRN
Sbjct: 241 GTFSGNTEAADWAVMWLPEGGDLVTESYVNLIPTAQGGTHVNGLRQGLLESMREFCEFRN 300

Query: 300 LLPRGVKLTGEDVFDRCAYVLSIKMQDPQFAGQTKERLSSRQSAAFVSGVVKDAFSLWLN 359
           L+PRGVKL+ +D++DRCAY+LS KMQDPQFAGQTKERLSSRQ++AFVSGVVKDAFSLWLN
Sbjct: 301 LMPRGVKLSPDDIWDRCAYILSTKMQDPQFAGQTKERLSSRQASAFVSGVVKDAFSLWLN 360

Query: 360 EKPQLAEQLAEVCIANAHSRMRASKKVVRKKIASGPALPGKLTDCTVQDLNRTELFLVEG 419
           +  ++AE LAE+CI NA  R+R +KKV RKK+  GPALPGKLTDC+ QD++ +ELFLVEG
Sbjct: 361 QHTEIAEALAEMCINNAQRRLRQTKKVARKKVTQGPALPGKLTDCSSQDISYSELFLVEG 420

Query: 420 DSAGGSAKQARDREFQAVMPLRGKILNTWEVSADQVLASQEVHDISVALGIDPDSDNLEA 479
           DSAGGSAKQARDREFQA+MPLRGKILN+WEV + QVLASQE+HDISVALGIDPDS +L  
Sbjct: 421 DSAGGSAKQARDREFQAIMPLRGKILNSWEVDSSQVLASQEIHDISVALGIDPDSTDLSG 480

Query: 480 LRYGKVCILADADSDGLHIATLLCALFTRHFRALVKAGHVYVAMPPLYRIDCGKEVFYAL 539
           LRYGK+CILADADSDGLHIATLLCALF RHFR LV+ GHVYVAMPPL+RID GKEV+YAL
Sbjct: 481 LRYGKICILADADSDGLHIATLLCALFVRHFRTLVEQGHVYVAMPPLFRIDVGKEVYYAL 540

Query: 540 DDQEKEGVLERL--SQKKAKVNVQRFKGLGEMNPLQLRETTMDPNTRRLVQLTIDDAEAT 597
           D+ EK+G+L+R+   +K+ KVNVQRFKGLGEMNPLQLRETTMDPNTRRLVQLTI+DAE  
Sbjct: 541 DEGEKQGILDRIEAEKKRGKVNVQRFKGLGEMNPLQLRETTMDPNTRRLVQLTIEDAEEM 600

Query: 598 DEMMDMLLGKKRADDRRAWLQRNGDMAEV 626
            E+MDMLL KKR+ DR+ WL+  G+MAEV
Sbjct: 601 MELMDMLLAKKRSGDRKTWLESKGNMAEV 629