Pairwise Alignments

Query, 761 a.a., DNA topoisomerase IV subunit A from Vibrio cholerae E7946 ATCC 55056

Subject, 867 a.a., DNA gyrase subunit A from Rhodanobacter sp000427505 FW510-R12

 Score =  388 bits (997), Expect = e-112
 Identities = 277/768 (36%), Positives = 417/768 (54%), Gaps = 73/768 (9%)

Query: 22  AYLNYSMYVIMDRALPYIGDGLKPVQRRIIYAMSELGLSASAKYKKSARTVGDVLGKYHP 81
           +YL+Y+M VI+ RALP + DGLKPV RR+++AM+ELG   +  YKKSAR VGDV+GKYHP
Sbjct: 20  SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNELGNVYNKPYKKSARVVGDVIGKYHP 79

Query: 82  HGDSACYEAMVLMAQPFSYRYPLVDGQGNWGAPDDPKSFAAMRYTEAKLSKFAEILLSEL 141
           HGD + Y+A+V +AQPFS RY LVDGQGN+G+ D   S AAMRYTE ++S+ +  LL+++
Sbjct: 80  HGDQSVYDAIVRLAQPFSLRYMLVDGQGNFGSVDG-DSAAAMRYTEVRMSRLSHELLADI 138

Query: 142 GQGTVDWQPNFDGTMQEPKMLPARLPHILLNGVTGIAVGMATDIPPHNVREVADATIHLI 201
            + TVD+ PN+D + QEP +LP R+P++L+NG  GIAVGMAT+IPPHN+ EV  ATI LI
Sbjct: 139 DKETVDFGPNYDESEQEPLVLPTRVPNLLVNGSAGIAVGMATNIPPHNLNEVIAATIALI 198

Query: 202 DNPNAPLTDLMQYVKGPDFPTEAEIITPTVELEKIYRSGRGSIKMRAVWCKE-----GSD 256
           D P   + DLM Y+ GPDFPT   II  +  + + YR+GRG I +RA    E        
Sbjct: 199 DEPALSIDDLMHYIPGPDFPTHG-IINGSSGIIEAYRTGRGRILVRAKAEIETEPNGRET 257

Query: 257 IVITALPHQVSGAKLLEQIAAQMRAKKLPMVEDLRDESDHENPTRIVIVPRSNRVDCDLL 316
           I++  LP+QV+ A+L+E+IA  ++ KKL  + +LRDESD +   R+VI  R + +  D++
Sbjct: 258 IIVHELPYQVNKARLIEKIAELVKEKKLEGISELRDESDKDG-MRVVIEIRKDAMG-DVV 315

Query: 317 MNHLFASTDLEKSFRVNLNMIGLDNRPQVKGLVQILSEWISFRRETVRSRLQYRLDKVLA 376
           +N+LF  T L+ +F +N+  + LD +P++  +  IL  +I  RRE V  R  + L K  A
Sbjct: 316 LNNLFQQTQLQVTFGINMVAL-LDGQPKLLNIKDILEAFIRHRREVVTRRTIFDLRKARA 374

Query: 377 RLHILQGLLIAYLNLDEVIEII-----------------------------------RNE 401
           R HIL+GL +A  N+DE+IE+I                                   R E
Sbjct: 375 RAHILEGLTVALANIDEMIELIKTSSSPAEARERMVVRRWEAGLVRTLLSASGAGASRPE 434

Query: 402 D-DPKAVLMA-RFDLTDIQADAILDTKLRHLAKLEEMKIRGEQDELEKERKKLEELLGSE 459
           D DP+  L A  + L++ QA  IL  +L  L  LE+ K+  E  ++ +  + L E+L + 
Sbjct: 435 DMDPRDGLKADGYQLSEAQALEILAMRLHRLTGLEQEKLSDEYRQILETIRGLIEILENP 494

Query: 460 RRLNNLLKKEIKADADKFGDDRRSPLVEREEAKALTERDLMPSEAITVVLSEKGWIRHAK 519
            RL  ++++E++A   +FGD RR+ +   +E   L   DL+  E + V LS  G+++   
Sbjct: 495 DRLLQVIREELEAIKAEFGDARRTEIQHSQE--DLNVLDLITPEDVVVTLSHTGYVKRQP 552

Query: 520 GHDVDCQSLNYKA------GDNYLTHACGKSNQQAVFL--GSDGRSYSLESHTLPSA--R 569
                 Q    +        D  +       N     L   S GR Y L+ + +P A   
Sbjct: 553 ASAYRAQRRGGRGRSASALKDEDVVEQLWVVNTHDTLLTFTSTGRVYWLKVYQMPEAGSG 612

Query: 570 GQGEPITGRLNVAEGTTIRQVVMGEE---DQLWLVGSDAGYGFVCKGDDLLSKNRSGKAL 626
            +G+PI   L + EG  ++ V+   E   D+     +  G        +   + + GK  
Sbjct: 613 ARGKPIINLLPLGEGEKVQAVLPVREYGDDRYVFFATKHGTVKKTPLTEFAYQLQKGKQA 672

Query: 627 INLPENSEVMTPQVIADLDNDEILAITNQGRMLLFPIKDLPQLSKGKGNKIINIPAAKAK 686
           I L E   ++  ++     N +IL   + G++  F    +    +  G     +   +  
Sbjct: 673 IKLDEGDALVNVELTD--GNSDILLFASNGKVNRFDENTV----RSMGRTATGVRGMRLA 726

Query: 687 TREEVLSNLMVLPQGASITLYAGKRKLGLKVSDLDNF-RGERGRRGAL 733
              EV+S L+V  QG  +T  A  R  G K + LD F +  RG +G +
Sbjct: 727 DGAEVVS-LIVAAQGDILT--ATARGYG-KRTRLDEFPKKGRGTQGVI 770