Pairwise Alignments

Query, 761 a.a., DNA topoisomerase IV subunit A from Vibrio cholerae E7946 ATCC 55056

Subject, 745 a.a., DNA topoisomerase 4 subunit A from Xanthobacter sp. DMC5

 Score =  551 bits (1420), Expect = e-161
 Identities = 310/747 (41%), Positives = 458/747 (61%), Gaps = 35/747 (4%)

Query: 10  VEQLPLRKFTEDAYLNYSMYVIMDRALPYIGDGLKPVQRRIIYAMSELGLSASAKYKKSA 69
           +E++ L++  E+ YL Y++  IM RALP   DGLKPV RRI++AM +L L     +KKSA
Sbjct: 13  IEKVTLKEALEERYLAYALSTIMHRALPDARDGLKPVHRRILHAMRQLRLDPGQGFKKSA 72

Query: 70  RTVGDVLGKYHPHGDSACYEAMVLMAQPFSYRYPLVDGQGNWGAPDDPKSFAAMRYTEAK 129
           R VGDV+GK+HPHGD + Y+A+V +AQ F+ RYPLVDGQGN+G  D   + AAMRYTEA+
Sbjct: 73  RVVGDVIGKFHPHGDQSVYDALVRLAQDFAQRYPLVDGQGNFGNVDGDNA-AAMRYTEAR 131

Query: 130 LSKFAEILLSELGQGTVDWQPNFDGTMQEPKMLPARLPHILLNGVTGIAVGMATDIPPHN 189
           L++ A +LL  + +  VD++P +DG+ +EP +LPA  P++L NG  GIAVGMAT IPPHN
Sbjct: 132 LTETARLLLDGIDEDAVDFRPTYDGSEEEPAVLPAAFPNLLANGSQGIAVGMATSIPPHN 191

Query: 190 VREVADATIHLIDNPNAPLTDLMQYVKGPDFPTEAEIITPTVELEKIYRSGRGSIKMRAV 249
             E+ DA +HLID+P+A   DL+++V GPDFPT   ++   V + + Y +GRGS ++RA 
Sbjct: 192 AAELLDAALHLIDHPDALAFDLLKFVPGPDFPTGGVLVEDPVGVAEAYATGRGSFRVRAR 251

Query: 250 WCKE-----GSDIVITALPHQVSGAKLLEQIAAQMRAKKLPMVEDLRDESDHENPTRIVI 304
           W KE     G  +V+T +P+ V+ ++L+E+IA  +  KKLP++ D+RDES  +   R+V+
Sbjct: 252 WEKEDTGRGGYVVVVTEIPYGVAKSRLVEKIAELLTDKKLPLLADVRDESAED--IRLVL 309

Query: 305 VPRSNRVDCDLLMNHLFASTDLEKSFRVNLNMIGLDNRPQVKGLVQILSEWISFRRETVR 364
            PR+  VD ++LM  LF  T+LE    +N+N++     P+V  L + L EW+  RR+ + 
Sbjct: 310 EPRTRTVDAEVLMESLFKLTELEARIPLNMNVLVKGQIPKVLSLAEALREWLDHRRDVLL 369

Query: 365 SRLQYRLDKVLARLHILQGLLIAYLNLDEVIEIIRNEDDPKAVLMARFDLTDIQADAILD 424
            R +YRLD++  RL +L G LIAYLNLDEVI IIR ED+PK  LM  F+LTD+QA+AIL+
Sbjct: 370 RRSRYRLDQIAHRLEVLGGYLIAYLNLDEVIRIIREEDEPKVSLMQTFELTDVQAEAILN 429

Query: 425 TKLRHLAKLEEMKIRGEQDELEKERKKLEELLGSERRLNNLLKKEIKADADKFGDD---- 480
            +LR L +LEEM+IR E D L KE+  L  L+ SE      + KEI+     +G +    
Sbjct: 430 MRLRSLRRLEEMEIRKEHDALSKEQDGLNRLVASETAQWKAISKEIRETRKTYGPETALG 489

Query: 481 RR------SPLVEREEAKALTERDLMPSEAITVVLSEKGWIRHAKGHDVDCQSLNYKAGD 534
           RR      +P V  +   A TE  L+  E +TVV+S KGWIR  KGH  D  +L +K  D
Sbjct: 490 RRRTTFAAAPTVHED---AFTEA-LVEREPVTVVVSAKGWIRALKGHVADVSNLQFKGDD 545

Query: 535 NYLTHACGKSNQQAVFLGSDGRSYSLESHTLPSARGQGEPITGRLNVAEGTTIRQVVMGE 594
           ++      ++  + +   S+GR Y+L++  LP  RG GEP+   +++ +   I  V   +
Sbjct: 546 SHGHAFFAETTSKVMVFASNGRFYTLDASKLPGGRGHGEPVRLMIDLEQEAEIVSVFAYQ 605

Query: 595 EDQLWLVGSDAGYGFVCKGDDLLSKNRSGK-ALINLPENSEVMTPQVIADLDNDEILAIT 653
             +  LV S  G GFV   DD L+  R GK  L+  P ++ +     +  +D D +  I 
Sbjct: 606 AGRKLLVASKQGRGFVVPEDDCLANTRKGKQVLVTDPPDAAL----AVRFVDGDWVAVIG 661

Query: 654 NQGRMLLFPIKDLPQLSKGKGNKIINIPAAKAKTREEVLSNLMVLPQGASITLYAGKRKL 713
              +ML+FP+  +P++S+G+G ++        + ++  LS+L V P    +T +      
Sbjct: 662 ENRKMLVFPLNQIPEMSRGRGVRL-------QRYKDGGLSDLKVFPMATGLT-WEDTSGR 713

Query: 714 GLKVSDLDNFRGERGRRGALLPRGLQR 740
              V+DL  ++GER   G L P+G  R
Sbjct: 714 TWTVTDLIEWQGERASAGRLPPKGFPR 740