Pairwise Alignments

Query, 761 a.a., DNA topoisomerase IV subunit A from Vibrio cholerae E7946 ATCC 55056

Subject, 754 a.a., DNA topoisomerase IV subunit A from Pseudomonas simiae WCS417

 Score = 1013 bits (2618), Expect = 0.0
 Identities = 493/745 (66%), Positives = 616/745 (82%), Gaps = 2/745 (0%)

Query: 6   SFDGVEQLPLRKFTEDAYLNYSMYVIMDRALPYIGDGLKPVQRRIIYAMSELGLSASAKY 65
           S DGVE+  L  FTE+AYLNYSMYVIMDRALP+IGDGLKPVQRRIIYAMSELGL A +K+
Sbjct: 8   SLDGVERRSLADFTENAYLNYSMYVIMDRALPHIGDGLKPVQRRIIYAMSELGLDADSKH 67

Query: 66  KKSARTVGDVLGKYHPHGDSACYEAMVLMAQPFSYRYPLVDGQGNWGAPDDPKSFAAMRY 125
           KKSARTVGDVLGK+HPHGDSACYEAMVLMAQPFSYRY LVDGQGNWGAPDDPKSFAAMRY
Sbjct: 68  KKSARTVGDVLGKFHPHGDSACYEAMVLMAQPFSYRYTLVDGQGNWGAPDDPKSFAAMRY 127

Query: 126 TEAKLSKFAEILLSELGQGTVDWQPNFDGTMQEPKMLPARLPHILLNGVTGIAVGMATDI 185
           TEA+LS+++E+LLSELGQGT DW PNFDGT+ EP +LPARLP+ILLNG TGIAVGMATD+
Sbjct: 128 TEARLSRYSEVLLSELGQGTADWGPNFDGTLDEPLVLPARLPNILLNGTTGIAVGMATDV 187

Query: 186 PPHNVREVADATIHLIDNPNAPLTDLMQYVKGPDFPTEAEIITPTVELEKIYRSGRGSIK 245
           PPHN+REVA A + L+D P A +  L ++++GPD+PTEAEIITP  +L K+Y +G+GS++
Sbjct: 188 PPHNLREVATACVRLLDEPKATVEQLCEHIQGPDYPTEAEIITPRADLLKMYETGKGSVR 247

Query: 246 MRAVWCKEGSDIVITALPHQVSGAKLLEQIAAQMRAK--KLPMVEDLRDESDHENPTRIV 303
           MRAV+  E  DI++TALPHQVSGAK+LEQIAA M+AK  KLP V DLRDESDHENP RIV
Sbjct: 248 MRAVYHIEDGDIIVTALPHQVSGAKVLEQIAALMQAKPSKLPQVADLRDESDHENPCRIV 307

Query: 304 IVPRSNRVDCDLLMNHLFASTDLEKSFRVNLNMIGLDNRPQVKGLVQILSEWISFRRETV 363
           I+P ++RVD ++LM HLFASTDLE S+RVN+N+IGLD +PQ+K L  +L EW+ FR +TV
Sbjct: 308 IIPTNSRVDHEVLMQHLFASTDLESSYRVNVNIIGLDGKPQLKNLRNLLVEWLEFRVQTV 367

Query: 364 RSRLQYRLDKVLARLHILQGLLIAYLNLDEVIEIIRNEDDPKAVLMARFDLTDIQADAIL 423
           R RLQ+RLDKV  RLH+L GLLIAYLNLDEVI IIR  + PKA L+ARF+L++IQAD IL
Sbjct: 368 RRRLQFRLDKVERRLHLLDGLLIAYLNLDEVIHIIRTAEHPKAELIARFELSEIQADYIL 427

Query: 424 DTKLRHLAKLEEMKIRGEQDELEKERKKLEELLGSERRLNNLLKKEIKADADKFGDDRRS 483
           DT+LR LA+LEEMK+R EQD L KE+ KL+ LLGSE +L  L++ E+  DA+ +GDDRRS
Sbjct: 428 DTRLRQLARLEEMKLRDEQDALLKEQAKLQALLGSEAKLKKLVRSELIKDAETYGDDRRS 487

Query: 484 PLVEREEAKALTERDLMPSEAITVVLSEKGWIRHAKGHDVDCQSLNYKAGDNYLTHACGK 543
           P+V+R EAKALTE +L+P+E ITVVLSEKGW+R AKGHD+D   L+YKAGD + T A G+
Sbjct: 488 PIVQRAEAKALTETELLPNEKITVVLSEKGWVRSAKGHDIDATGLSYKAGDGFKTAAAGR 547

Query: 544 SNQQAVFLGSDGRSYSLESHTLPSARGQGEPITGRLNVAEGTTIRQVVMGEEDQLWLVGS 603
           SNQ AVF+ S GRSYS+ +HTLPSARGQGEP+TGRL    G     V++ ++D L+++ S
Sbjct: 548 SNQFAVFIDSTGRSYSVPAHTLPSARGQGEPLTGRLTPPPGANFECVLLPDDDALYVIAS 607

Query: 604 DAGYGFVCKGDDLLSKNRSGKALINLPENSEVMTPQVIADLDNDEILAITNQGRMLLFPI 663
           DAGYGFV KG+DL +KN++GKAL++LP N++V+ P+ + D + + + ++T +GR+L+F I
Sbjct: 608 DAGYGFVVKGEDLQAKNKAGKALLSLPNNAKVILPRPVDDREGNWLASVTTEGRLLVFKI 667

Query: 664 KDLPQLSKGKGNKIINIPAAKAKTREEVLSNLMVLPQGASITLYAGKRKLGLKVSDLDNF 723
            DLPQL KGKGNKII IP  +  +REE ++++ V+P+GA++ L AGKR L L+  DL+++
Sbjct: 668 SDLPQLGKGKGNKIIGIPGERVASREEYVTDIAVIPEGATLVLQAGKRTLSLRPDDLEHY 727

Query: 724 RGERGRRGALLPRGLQRVTAIEIET 748
           +GERGRRG  LPRG QRV A+ +ET
Sbjct: 728 KGERGRRGNKLPRGFQRVDALLVET 752