Pairwise Alignments

Query, 761 a.a., DNA topoisomerase IV subunit A from Vibrio cholerae E7946 ATCC 55056

Subject, 775 a.a., DNA topoisomerase IV subunit A (EC 5.99.1.3) from Sphingobium sp. HT1-2

 Score =  507 bits (1306), Expect = e-148
 Identities = 305/776 (39%), Positives = 451/776 (58%), Gaps = 54/776 (6%)

Query: 7   FDGVEQLPLRKFTEDAYLNYSMYVIMDRALPYIGDGLKPVQRRIIYAMSELGLSA----- 61
           FD ++  P        YL Y++  I  R+LP + DGLKPV RR+++AM  L +       
Sbjct: 8   FDAIKDHPFDAALSQRYLVYALSTITARSLPDLRDGLKPVHRRLLWAMRLLRMEPGGANP 67

Query: 62  ----------SAKYKKSARTVGDVLGKYHPHGDSACYEAMVLMAQPFSYRYPLVDGQGNW 111
                     +  YKK AR VGDV+GKYHPHGD++ Y+AMV +AQ FS R PLVDGQGN+
Sbjct: 68  DVLVANPARNTTSYKKCARVVGDVIGKYHPHGDASVYDAMVRLAQDFSLRTPLVDGQGNF 127

Query: 112 GAPDDPKSFAAMRYTEAKLSKFAEILLSELGQGTVDWQPNFDGTMQEPKMLPARLPHILL 171
           G  D   + AAMRYTEA+L++ A  L++ L +GTVD++P ++G  +EP++ P   P++L 
Sbjct: 128 GNIDGDNA-AAMRYTEARLTQAAADLMAGLDEGTVDFRPTYNGEDEEPEVFPGLFPNLLA 186

Query: 172 NGVTGIAVGMATDIPPHNVREVADATIHLIDNPNAPLTDLMQYVKGPDFPTEAEIITPTV 231
           NG +GIAVGMAT IPPHNV E+ DA   LID+P A    LM+ VKGPDFPT   ++    
Sbjct: 187 NGASGIAVGMATSIPPHNVGELLDAATLLIDSPEADDAALMEIVKGPDFPTGGVLVDNQA 246

Query: 232 ELEKIYRSGRGSIKMRA----------VWCKEGSD--------IVITALPHQVSGAKLLE 273
            + + YR+GRGS + RA           W  EG +        +VI+ +P+QV  +KL+E
Sbjct: 247 IISEAYRTGRGSFRTRARFSTGRNEDGSWEAEGIEKLAGGTWQLVISEIPYQVQKSKLIE 306

Query: 274 QIAAQMRAKKLPMVEDLRDESDHENPTRIVIVPRSNRVDCDLLMNHLFASTDLEKSFRVN 333
           QIAA +  KKLP++ED+RDESD     RIVIVP+S  V  D+L + LF  TDLE  F +N
Sbjct: 307 QIAALINDKKLPILEDVRDESDEA--IRIVIVPKSRNVPVDILKDSLFRLTDLENRFPLN 364

Query: 334 LNMIGLDNRPQVKGLVQILSEWISFRRETVRSRLQYRLDKVLARLHILQGLLIAYLNLDE 393
           LN++   + P+V GL  +L EW+  + E +  R Q+RL+K+ ARL +L G +IAYLNLD 
Sbjct: 365 LNVLDASHTPRVLGLRAVLVEWLKHQIEVLVRRAQHRLEKIAARLELLDGYIIAYLNLDR 424

Query: 394 VIEIIRNEDDPKAVLMARFDLTDIQADAILDTKLRHLAKLEEMKIRGEQDELEKERKKLE 453
           VIEIIR ED+PK V+M  F LTD QA+AIL+ +LR L KLEEM++R E  EL KE+ +LE
Sbjct: 425 VIEIIRTEDEPKDVMMDEFSLTDRQAEAILNMRLRSLRKLEEMELRREHAELVKEQAELE 484

Query: 454 ELLGSERRLNNLLKKEIKADADKFGDD-----RRSPLVEREEAKALTERDLMPSEAITVV 508
           +L+ S  R    LK++I     ++G D     RR+ + E   A+ +    ++  E +TV+
Sbjct: 485 KLVESPARQRTRLKRDIADLRKRYGPDTVIGRRRTLVEEAGPAREIPLEAMIEREPVTVI 544

Query: 509 LSEKGWIRHAKGHD--VDCQSLNYKAGDNYLTHACGKSNQQAVFLGSDGRSYSLESHTLP 566
           LSE+GWIR   GH       +L +K GD         +  + +   S GR Y+L +  LP
Sbjct: 545 LSERGWIRAMSGHRDLAAADTLKFKEGDGPQFAFHAYTTDKLLMATSSGRIYTLGADKLP 604

Query: 567 SARGQGEPITGRLNVAEGTTIRQVVMGEEDQLWLVGSDAGYGFVCKGDDLLSKNRSGKAL 626
             RG G+P+   +++ +   I  ++        L+ S  G GF+    D+L++ R GK +
Sbjct: 605 GGRGFGDPVRMMVDMDDQGGIVALMPARTGGQLLLASSDGRGFLADVADILAETRKGKQV 664

Query: 627 INLPENSEVMTPQVIADLDNDEILAITNQGRMLLFPIKDLPQLSKGKGNKIINIPAAKAK 686
           +N+   +++     + D + D I  I    ++L++ I ++P++++G+G ++        +
Sbjct: 665 VNVRTGAKLAVVHAV-DPEADSIAVIGENRKLLVYSIIEMPKMARGQGVQM-------QR 716

Query: 687 TREEVLSNLMV--LPQGASITLYAGKRKLGLKVSDLDNFRGERGRRGALLPRGLQR 740
            R+  LS+ +   L  G S  +  G+       +D+  +R  RG  G + P G  R
Sbjct: 717 YRDGGLSDAIAFRLSDGISWAM-GGETGRTRTEADMTPWRVARGAAGRMPPTGFPR 771