Pairwise Alignments

Query, 761 a.a., DNA topoisomerase IV subunit A from Vibrio cholerae E7946 ATCC 55056

Subject, 752 a.a., DNA topoisomerase IV subunit A from Pseudomonas putida KT2440

 Score = 1041 bits (2693), Expect = 0.0
 Identities = 505/746 (67%), Positives = 619/746 (82%)

Query: 2   STEISFDGVEQLPLRKFTEDAYLNYSMYVIMDRALPYIGDGLKPVQRRIIYAMSELGLSA 61
           S E+S DGVE+  L  FTE AYLNYSMYVIMDRALP+IGDGLKPVQRRI+YAMSELGL A
Sbjct: 4   SLELSLDGVERRSLADFTEQAYLNYSMYVIMDRALPHIGDGLKPVQRRIVYAMSELGLDA 63

Query: 62  SAKYKKSARTVGDVLGKYHPHGDSACYEAMVLMAQPFSYRYPLVDGQGNWGAPDDPKSFA 121
            AK+KKSARTVGDVLGK+HPHGDSACYEAMVLMAQPFSYRY LVDGQGNWGAPDDPKSFA
Sbjct: 64  DAKHKKSARTVGDVLGKFHPHGDSACYEAMVLMAQPFSYRYTLVDGQGNWGAPDDPKSFA 123

Query: 122 AMRYTEAKLSKFAEILLSELGQGTVDWQPNFDGTMQEPKMLPARLPHILLNGVTGIAVGM 181
           AMRYTEA+LS++AE+LLSE+GQGTVDW PNFDGT+QEP +LPARLP+ILLNG TGIAVGM
Sbjct: 124 AMRYTEARLSRYAEVLLSEVGQGTVDWVPNFDGTLQEPAVLPARLPNILLNGTTGIAVGM 183

Query: 182 ATDIPPHNVREVADATIHLIDNPNAPLTDLMQYVKGPDFPTEAEIITPTVELEKIYRSGR 241
           ATD+PPHN+REVA A + L+D P A +  L ++++GPD+PTEAEI+TP  E+ K+Y SGR
Sbjct: 184 ATDVPPHNLREVASACVRLLDEPKATIEQLCEHIQGPDYPTEAEIVTPRAEILKMYESGR 243

Query: 242 GSIKMRAVWCKEGSDIVITALPHQVSGAKLLEQIAAQMRAKKLPMVEDLRDESDHENPTR 301
           GSI+MRAV+  E  DIV+TALPHQVSGAK+LEQIAAQM+AKKLPMV DLRDESDHENP R
Sbjct: 244 GSIRMRAVYRVEDGDIVVTALPHQVSGAKVLEQIAAQMQAKKLPMVADLRDESDHENPCR 303

Query: 302 IVIVPRSNRVDCDLLMNHLFASTDLEKSFRVNLNMIGLDNRPQVKGLVQILSEWISFRRE 361
           IVI+PRSNRVD D LM HLFA+TDLE ++RVN+N+IGLD RPQ+K L  +L EW+ FR  
Sbjct: 304 IVIIPRSNRVDVDELMQHLFATTDLESTYRVNVNIIGLDGRPQLKNLRTLLVEWLEFRTN 363

Query: 362 TVRSRLQYRLDKVLARLHILQGLLIAYLNLDEVIEIIRNEDDPKAVLMARFDLTDIQADA 421
           TVR RLQ+RLDKV  RLH+L GLL A+LNLDEVI IIR E+ PK  L+ RF+LT+IQAD 
Sbjct: 364 TVRRRLQHRLDKVEKRLHLLDGLLTAFLNLDEVIHIIRTEEYPKQALIERFELTEIQADY 423

Query: 422 ILDTKLRHLAKLEEMKIRGEQDELEKERKKLEELLGSERRLNNLLKKEIKADADKFGDDR 481
           IL+T+LR LA+LEEMKIRGEQDEL KE+ KL+ LLGSE +L  L++ E+  DA+ +GDDR
Sbjct: 424 ILETRLRQLARLEEMKIRGEQDELLKEQAKLQALLGSEAKLRKLVRSELIKDAETYGDDR 483

Query: 482 RSPLVEREEAKALTERDLMPSEAITVVLSEKGWIRHAKGHDVDCQSLNYKAGDNYLTHAC 541
           RSP+V R EAKAL+E +LMP+E +TVVLSEKGW+R AKGHD+D   L+YKAGD +   A 
Sbjct: 484 RSPIVARAEAKALSENELMPTEPVTVVLSEKGWVRCAKGHDIDATGLSYKAGDGFKAAAA 543

Query: 542 GKSNQQAVFLGSDGRSYSLESHTLPSARGQGEPITGRLNVAEGTTIRQVVMGEEDQLWLV 601
           G+SNQ AV + S GRSYSL +H+LPSARGQGEP+TGRL    G T   V++ ++D L++V
Sbjct: 544 GRSNQFAVLIDSTGRSYSLAAHSLPSARGQGEPLTGRLTPPPGATFECVLLPDDDALYVV 603

Query: 602 GSDAGYGFVCKGDDLLSKNRSGKALINLPENSEVMTPQVIADLDNDEILAITNQGRMLLF 661
            SDAGYGFV KG+DL +KN++GK L++LP  ++VMTP+ +AD + D + A+T +GR+L+F
Sbjct: 604 ASDAGYGFVVKGEDLQAKNKAGKGLLSLPNGAKVMTPRPVADREQDWLAAVTTEGRLLVF 663

Query: 662 PIKDLPQLSKGKGNKIINIPAAKAKTREEVLSNLMVLPQGASITLYAGKRKLGLKVSDLD 721
            + DLPQL KGKGNKII +P  +  +REE +++L V+P+GA++ L AGKR L LK  DL+
Sbjct: 664 KVSDLPQLGKGKGNKIIGVPGDRVASREEFVTDLAVIPEGATLVLQAGKRTLSLKADDLE 723

Query: 722 NFRGERGRRGALLPRGLQRVTAIEIE 747
           +++GERGRRG+ LPRG QRV  +++E
Sbjct: 724 HYKGERGRRGSKLPRGFQRVDGLQVE 749