Pairwise Alignments

Query, 761 a.a., DNA topoisomerase IV subunit A from Vibrio cholerae E7946 ATCC 55056

Subject, 854 a.a., DNA gyrase subunit A from Pontibacter actiniarum KMM 6156, DSM 19842

 Score =  402 bits (1032), Expect = e-116
 Identities = 236/589 (40%), Positives = 358/589 (60%), Gaps = 26/589 (4%)

Query: 22  AYLNYSMYVIMDRALPYIGDGLKPVQRRIIYAMSELGLSASAKYKKSARTVGDVLGKYHP 81
           AY++YSM VI+ RALP + DGLKPV RR++Y MSELG+S +  YKKSAR VG+VLGKYHP
Sbjct: 19  AYIDYSMSVIISRALPDVRDGLKPVHRRVLYGMSELGVSYNKSYKKSARIVGEVLGKYHP 78

Query: 82  HGDSACYEAMVLMAQPFSYRYPLVDGQGNWGAPDDPKSFAAMRYTEAKLSKFAEILLSEL 141
           HGDS+ YE MV MAQ +S RYPLVDGQGN+G+ D   S AAMRYTEA+L + A+ LL++L
Sbjct: 79  HGDSSVYETMVRMAQEWSLRYPLVDGQGNYGSIDG-DSPAAMRYTEARLKRIADELLADL 137

Query: 142 GQGTVDWQPNFDGTMQEPKMLPARLPHILLNGVTGIAVGMATDIPPHNVREVADATIHLI 201
            + TVD+ PNFD +++EP ++PA+LP++L+NG +GIAVGMAT++ PHN+ EV +     I
Sbjct: 138 DKNTVDFVPNFDDSLKEPSVMPAKLPNLLVNGTSGIAVGMATNMAPHNLTEVVNGITAYI 197

Query: 202 DNPNAPLTDLMQYVKGPDFPTEAEIITPTVELEKIYRSGRGSIKMRAVWCKEGS-----D 256
           DN +  + +LMQY+  PDFPT   II     ++  + +GRG + MRA    E +      
Sbjct: 198 DNRDITIAELMQYITAPDFPT-GGIIHGYDGVKSAFETGRGRVLMRARANFETTPSGKEQ 256

Query: 257 IVITALPHQVSGAKLLEQIAAQMRAKKLPMVEDLRDESDHENPTRIVIVPRSNRVDCDLL 316
           I++T +P+ V+ A L+E+ AA +  KK+  + DLRDESD +   RIV   + + +  +++
Sbjct: 257 IIVTEIPYMVNKATLIEKTAALINEKKIEGISDLRDESDRDG-LRIVYDLKRDAIP-NVV 314

Query: 317 MNHLFASTDLEKSFRVNLNMIGLDNRPQVKGLVQILSEWISFRRETVRSRLQYRLDKVLA 376
           +N+L+  T L+ SF VN N+  +  RP    L +++  ++  R E V  R QY LD+   
Sbjct: 315 LNNLYKYTALQSSFGVN-NVALVKGRPMTLNLKELIQYFVEHRHEVVVRRTQYELDEAKK 373

Query: 377 RLHILQGLLIAYLNLDEVIEIIRNEDDPKAV---LMARFDLTDIQADAILDTKLRHLAKL 433
           R HIL+GLLIA  NLDEVI +IR+  DP+     L+ RF L++IQA AILD +L+ L  L
Sbjct: 374 RAHILEGLLIALDNLDEVINLIRSSRDPEVARNGLIERFQLSEIQARAILDMRLQRLTGL 433

Query: 434 EEMKIRGEQDELEKERKKLEELLGSERRLNNLLKKEIKADADKFGDDRRSPLVEREEAKA 493
           E  KI+ E +E+ K    L  +L  E     ++K E+    +++GD RR+ +        
Sbjct: 434 ERDKIQQEYEEIMKLIDYLTSILNDEGLRMQIIKDELAEIKERYGDGRRTGI--EASTGD 491

Query: 494 LTERDLMPSEAITVVLSEKGWIRHAKGHDVDCQS--------LNYKAGDNYLTHA-CGKS 544
           ++  D++P E + + +S +G+I+    ++   QS        +      ++  H     +
Sbjct: 492 ISYEDMIPEENMVITISHEGYIKRTSLNEYRSQSRGGVGSRGVAASKDSDFTEHLFIANT 551

Query: 545 NQQAVFLGSDGRSYSLESHTLPSA--RGQGEPITGRLNVAEGTTIRQVV 591
           +   +F    GR + L+ + +P      +G  I   + + +   +R V+
Sbjct: 552 HHHMLFFTEFGRVFWLKVYEIPEGGKTTKGRAIQNLIQIEKDDKVRAVL 600