Pairwise Alignments

Query, 761 a.a., DNA topoisomerase IV subunit A from Vibrio cholerae E7946 ATCC 55056

Subject, 782 a.a., Topoisomerase IV subunit A (EC 5.99.1.-) from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  553 bits (1425), Expect = e-161
 Identities = 325/778 (41%), Positives = 466/778 (59%), Gaps = 61/778 (7%)

Query: 15  LRKFTEDAYLNYSMYVIMDRALPYIGDGLKPVQRRIIYAMSELGLSAS-------AKYKK 67
           L  + + AYL Y++ V+  RALP + DG KPVQRRI+Y+M  +GL  S       A+  K
Sbjct: 19  LANYAQRAYLEYALSVVKGRALPDVCDGQKPVQRRILYSMDRMGLGFSGPNRNTAARPVK 78

Query: 68  SARTVGDVLGKYHPHGDSACYEAMVLMAQPFSYRYPLVDGQGNWGAPDDPKSFAAMRYTE 127
           SAR VGDVLG++HPHGD A Y+A+V MAQ F+ RYPL+DGQGN+G+ D   + AAMRYTE
Sbjct: 79  SARVVGDVLGRFHPHGDQAAYDALVRMAQDFAQRYPLIDGQGNFGSRDGDGA-AAMRYTE 137

Query: 128 AKLSKFAEILLSELGQGTVDWQPNFDGTMQEPKMLPARLPHILLNGVTGIAVGMATDIPP 187
           A+LS+   +LL E+ +GTVD+ PN+DG+  EPK LPARLP  LLNG +GIAVG+AT+IP 
Sbjct: 138 ARLSRITTLLLDEIDEGTVDFVPNYDGSTVEPKQLPARLPFNLLNGASGIAVGLATEIPS 197

Query: 188 HNVREVADATIHLIDNPNAPLTDLMQYVKGPDFPTEAEIITPTVELEKIYRSGRGSIKMR 247
           HN+REVADA + L+ NP     +L+  + GPD+P   +II+P  ++   YR+GRGS+K+R
Sbjct: 198 HNLREVADACVALVKNPKLADDELLTLLPGPDYPGGGQIISPASDIADAYRTGRGSLKVR 257

Query: 248 AVWCKEGS-----DIVITALPHQVSGAKLLEQIA------------------AQMRAKKL 284
           A W  E        +V+T LP  VS  ++LE+I                    Q++A  L
Sbjct: 258 ARWKIEDLARGQWQLVVTELPPGVSTQRVLEEIEELTNPKVKAGKKALTQEQTQLKASIL 317

Query: 285 PMVEDLRDESDHENPTRIVIVPRSNRVDCDLLMNHLFASTDLEKSFRVNLNMIGLDNRPQ 344
            +++ +RDES  + P R++  P+S+R++   L+  L A T LE S  +NL M+GLD RP 
Sbjct: 318 MVLDGVRDESSKDAPVRLLFEPKSSRIEQQELITALLAHTSLETSAPINLTMVGLDGRPT 377

Query: 345 VKGLVQILSEWISFRRETVRSRLQYRLDKVLARLHILQGLLIAYLNLDEVIEIIRNEDDP 404
            K L Q+L+EWI FR+ T+  R Q+RL KVL R+HIL+G  +  LN+DEVI IIR+ D+P
Sbjct: 378 QKSLRQMLTEWIEFRQGTITRRSQHRLTKVLDRIHILEGRQLVLLNIDEVIRIIRHSDEP 437

Query: 405 KAVLMARFDLTDIQADAILDTKLRHLAKLEEMKIRGEQDELEKERKKLEELLGSERRLNN 464
           KA L+ RF L+D QA+ IL+ +LR LA+LE +KI  E  EL +E+ KLE++LG+   L  
Sbjct: 438 KAALIERFKLSDRQAEDILEIRLRQLARLEAIKIEQELKELREEQGKLEDILGNPGSLKR 497

Query: 465 LLKKEIKADADKFGDDRRSPLVEREEAKALTERDLMPSEAITVVLSEKGWIRHAKGHDVD 524
           L+ KEI+ADA  F D+RR+ +  + E KA+ E  ++  E +TVV+S KGW+R   GH  +
Sbjct: 498 LMVKEIEADAKTFADERRTLI--QAEKKAVAEIKVV-DEPVTVVISSKGWVRARTGHGHE 554

Query: 525 CQSLNYKAGDN-YLTHACGKSNQQAVFLGSDGRSYSLESHTLPSARGQGEPITGRLNVAE 583
             S  +KAGD  Y T  C ++    +  GS+GR YS+   +LP ARG G+PIT  + +  
Sbjct: 555 AGSFAFKAGDGLYGTFEC-RTVDTLITFGSNGRVYSVPVASLPGARGDGQPITTLIELES 613

Query: 584 GTTIRQVVMGEEDQLWLVGSDAGYGFVCKGDDLLSKNRSGKALINLPENSEVMTPQVIAD 643
           GT       G  +   L+ S  GYGF+   ++++S+ R GK  +NL E      P   A 
Sbjct: 614 GTQPLHYFAGPANAALLLSSSGGYGFLATVENMVSRQRGGKTFLNLGEGETPCAPSHAAF 673

Query: 644 LDN-------DEILAITNQGRMLLFPIKDLPQLSK-GKGNKIINIPA------AKAKTRE 689
                       +   +  GR+L F I +L  + K G+G  +I++ A      A A TR 
Sbjct: 674 TSGGVPLVPATHVCCASTGGRILTFEIGELKLMEKGGRGLMLIDLEAKDTLAGAAAYTRS 733

Query: 690 EVLSNLMVLPQGASITLYAGKRKLGLKVSDLDNFRGERGRRGALLPRGLQ--RVTAIE 745
             +     + +G        +R+  L++  L+N R  R R+G     G +  R+T +E
Sbjct: 734 VKIEG---IGRGGK------EREETLEIRSLNNARAARARKGKAADLGFKPNRITRVE 782