Pairwise Alignments

Query, 761 a.a., DNA topoisomerase IV subunit A from Vibrio cholerae E7946 ATCC 55056

Subject, 895 a.a., DNA gyrase subunit A from Magnetospirillum magneticum AMB-1

 Score =  391 bits (1004), Expect = e-112
 Identities = 262/725 (36%), Positives = 393/725 (54%), Gaps = 68/725 (9%)

Query: 22  AYLNYSMYVIMDRALPYIGDGLKPVQRRIIYAMSELGLSASAKYKKSARTVGDVLGKYHP 81
           +YL+Y+M VI+ RALP + DGLKPV RRI++AM+E G   +  ++KSAR VGDV+GKYHP
Sbjct: 24  SYLDYAMSVIVSRALPDVRDGLKPVHRRILFAMNEAGYHFNKPFRKSARIVGDVMGKYHP 83

Query: 82  HGDSACYEAMVLMAQPFSYRYPLVDGQGNWGAPD-DPKSFAAMRYTEAKLSKFAEILLSE 140
           HGDSA Y+AMV MAQ FS R PLVDGQGN+G+ D DP   AAMRYTEA+L++ A  LL +
Sbjct: 84  HGDSAIYDAMVRMAQNFSMRLPLVDGQGNFGSMDGDPP--AAMRYTEARLARSAHSLLED 141

Query: 141 LGQGTVDWQPNFDGTMQEPKMLPARLPHILLNGVTGIAVGMATDIPPHNVREVADATIHL 200
           + + TVD+Q N+D +  EP +LPAR P++L+NG  GIAVGMAT+IPPHN+ EV DA    
Sbjct: 142 IDKETVDFQANYDESTHEPMVLPARYPNLLVNGAGGIAVGMATNIPPHNLGEVIDACCAY 201

Query: 201 IDNPNAPLTDLMQYVKGPDFPTEAEIITPTVELEKIYRSGRGSIKMRA-----VWCKEGS 255
           ID+P   +  LM+ V GPDFPT   I+     +     +GRGS+ MR         K+  
Sbjct: 202 IDDPEVTVERLMELVPGPDFPTGGTIL-GRAGIRAAQLTGRGSVVMRGRVHIEEVRKDRE 260

Query: 256 DIVITALPHQVSGAKLLEQIAAQMRAKKLPMVEDLRDESDHENPTRIVIVPRSNRVDCDL 315
            IV+T +P+QV+ A++LEQIA  +R KK+  + DLRDESD +    +V + R      ++
Sbjct: 261 AIVVTEIPYQVNKARMLEQIAELVRDKKIEGISDLRDESDRDGVRMVVEIKRD--AIAEV 318

Query: 316 LMNHLFASTDLEKSFRVNLNMIGLDNRPQVKGLVQILSEWISFRRETVRSRLQYRLDKVL 375
           ++  L+  T L+ SF VN   +    RP++  L  I+  +I+FR E +  R  + L K  
Sbjct: 319 VLAQLYRFTPLQTSFGVNSLALN-GGRPEMMTLRDIIVAFIAFREEVITRRTIFELGKAR 377

Query: 376 ARLHILQGLLIAYLNLDEVIEIIRNEDDP---KAVLMAR--------------------- 411
            R H+L GL IA  N+DEVI +IR   DP   +  LM R                     
Sbjct: 378 DRAHVLAGLAIAVANIDEVIRLIRAAPDPGEAREKLMTRAWPVGDVEPLIRLIDEPGRAI 437

Query: 412 ----FDLTDIQADAILDTKLRHLAKLEEMKIRGEQDELEKERKKLEELLGSERRLNNLLK 467
               + L+++QA AILD +L  L  LE  KI  E  E+  + +    +L S  RL  +++
Sbjct: 438 EDGCYRLSEVQAKAILDLRLHRLTGLERDKIGDELREIGHQIEAYLLILSSRPRLMEVMR 497

Query: 468 KEIKADADKFGDDRRSPLVEREEAKALTERDLMPSEAITVVLSEKGWI--------RHAK 519
            E+    ++F   RR+ + E E    +   DL+  E + V ++  G+I        R  K
Sbjct: 498 GELMEIREQFATPRRTTIEENEFEADI--EDLIAREDMVVTVTNTGYIKRVPLSAYRAQK 555

Query: 520 GHDVDCQSLNYKAGDNYLTHACGKSNQQAVFLGSDGRSYSLESHTLP--SARGQGEPITG 577
                   +N K  D         ++   +F  S G +Y L+ + LP  + + +G+ +  
Sbjct: 556 RGGKGRSGMNIKDEDFLTQVFVVNTHTPVLFFSSTGIAYKLKVYRLPLGNPQARGKAMVN 615

Query: 578 RLNVAEGTTIRQVV-MGEEDQLWLVGSDAGYGFV-CKGD-------DLLSKNRSGKALIN 628
            L + +G TI  ++ + E++  W    D    FV  KGD       D      +GK  + 
Sbjct: 616 LLPLDDGETISTIMPLPEDETTW---GDLHVMFVTSKGDVRRNPLSDFTEVRANGKIAMK 672

Query: 629 LPENSEVMTPQVIADLDNDEILAITNQGRMLLFPIKDLPQLSKGKGNKIINIPAAKAKTR 688
           L E   +++ Q     ++D++L  T++G+ + FP++D+ +    K      +   +    
Sbjct: 673 LGEGERLISVQT-CSAESDDVLLATHRGKAIRFPVQDVREF---KSRDSTGVRGIRLDGE 728

Query: 689 EEVLS 693
           +EV+S
Sbjct: 729 DEVIS 733