Pairwise Alignments

Query, 761 a.a., DNA topoisomerase IV subunit A from Vibrio cholerae E7946 ATCC 55056

Subject, 876 a.a., Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  178 bits (451), Expect = 1e-48
 Identities = 141/475 (29%), Positives = 246/475 (51%), Gaps = 45/475 (9%)

Query: 11  EQLPLRKFTEDAYLNYSMYVIMDRALPYIGDGLKPVQRRIIYAMSELGLSASAKYKKSAR 70
           + +P+    ++ +L+Y+ YVI++RA+P I DG KPVQRRI++AM E+      ++ K A 
Sbjct: 18  DSVPVTGMYQEWFLDYASYVILERAVPAIEDGFKPVQRRILHAMKEMD---DGRFNKVAN 74

Query: 71  TVGDVLGKYHPHGDSACYEAMVLMAQPFSYRYPLVDGQGNWGAPDDPKSFAAMRYTEAKL 130
            +G  + +YHPHGD++  +A+V + Q    +  L++ QGNWG        AA RY EA+L
Sbjct: 75  IIGQTM-QYHPHGDASISDAIVNLGQ----KDLLIETQGNWGDIRTGDGAAAARYIEARL 129

Query: 131 SKFAEILLSELGQGTVDWQPNFDGTMQEPKMLPARLPHILLNGVTGIAVGMATDIPPHNV 190
           SKFA  L       T DWQ ++DG  +EP  LP + P +L  GV GIAVG++T I PHN 
Sbjct: 130 SKFA--LEVVFNPQTTDWQVSYDGRKREPVTLPVKFPLLLAQGVEGIAVGLSTKILPHNF 187

Query: 191 REVADATIHLIDNPNAPLTDLMQYVKGPDFPTEAEIITPTVELEKIYRSGRGSIKMRA-V 249
            E+ +A++ ++    A +         PDFPT    +    E  +  R G+  IK+RA +
Sbjct: 188 CELINASVDVLKGKKANIV--------PDFPTGG--LADFSEYNEGLRGGK--IKVRARI 235

Query: 250 WCKEGSDIVITALPHQVSGAKLLEQIAAQMRAKKLPMVEDLRDESDHENPTRIVIVPRSN 309
              +G  ++I  +P   +   L++ I       K+  ++ + D +  +   ++ + P  +
Sbjct: 236 EEGDGKSLLIKDIPFGTTTTSLIDSIIKANDKGKI-KIKKVVDNTAKDVEIQVFLAPGQS 294

Query: 310 RVDCDLLMNHLFASTDLEKSFRVNLNMIGLDNRPQVKGLVQILSEWISFRRETVRSRLQY 369
               D+ ++ L+A TD E+S   N  +I +D++P   G+  IL+   +  +  ++  L+ 
Sbjct: 295 P---DMTIDALYAFTDCEQSISPNACVI-IDDKPVFMGVNDILAYNTTQTKALLKRELEI 350

Query: 370 RLDKVLARL--HILQGLLI---AYLNLDE------VIEIIRNEDDPKAVLMARFDLTDIQ 418
           R  +++ +L    L+ + I    Y +++E      VI+ I    DP      R ++T   
Sbjct: 351 RKGELMEKLLFSSLEKIFIENRIYRDIEECETWEDVIDTIDKGLDPHKPDFYR-EITKDD 409

Query: 419 ADAILDTKLRHLAKLEEMK----IRGEQDELEKERKKLEELLG-SERRLNNLLKK 468
              + + K++ +++ +  K    +R  +DEL++    LE L   +     NLLKK
Sbjct: 410 IIRLTEIKIKRISRFDSFKADELMRKLEDELKEVEYNLEHLTEFAIDYYKNLLKK 464