Pairwise Alignments

Query, 761 a.a., DNA topoisomerase IV subunit A from Vibrio cholerae E7946 ATCC 55056

Subject, 750 a.a., topoisomerase IV subunit A from Agrobacterium fabrum C58

 Score =  526 bits (1356), Expect = e-153
 Identities = 294/748 (39%), Positives = 453/748 (60%), Gaps = 31/748 (4%)

Query: 8   DGVEQLPLRKFTEDAYLNYSMYVIMDRALPYIGDGLKPVQRRIIYAMSELGLSASAKYKK 67
           D +  + L+   E+ YL Y++  IM RALP + DGLKPV RRII+AMSE+G+  ++ +KK
Sbjct: 13  DNIHPVDLKAALEERYLAYALSTIMHRALPDVRDGLKPVHRRIIHAMSEMGIRPNSAFKK 72

Query: 68  SARTVGDVLGKYHPHGDSACYEAMVLMAQPFSYRYPLVDGQGNWGAPDDPKSFAAMRYTE 127
            AR VGDV+GK+HPHGD + Y+A+V +AQ FS RYP+VDGQGN+G  D   + AA RYTE
Sbjct: 73  CARIVGDVIGKFHPHGDQSVYDALVRLAQDFSQRYPIVDGQGNFGNIDGDGA-AAYRYTE 131

Query: 128 AKLSKFAEILLSELGQGTVDWQPNFDGTMQEPKMLPARLPHILLNGVTGIAVGMATDIPP 187
           A+++  A +LL  +G+  VD++  ++   +EP +LP   P++L NG +GIAVGMAT IPP
Sbjct: 132 ARMTDVAALLLEGIGEDAVDFRATYNEEDEEPVVLPGAFPNLLANGASGIAVGMATSIPP 191

Query: 188 HNVREVADATIHLIDNPNAPLTDLMQYVKGPDFPTEAEIITPTVELEKIYRSGRGSIKMR 247
           HN  E+ DA +HLI +P+A +  L++++ GPD PT   II     +   Y++GRG  ++R
Sbjct: 192 HNAHELCDAALHLIKHPDATVEKLVEFIPGPDLPTGGVIIESRENILDAYKTGRGGFRVR 251

Query: 248 AVWCKE-----GSDIVITALPHQVSGAKLLEQIAAQMRAKKLPMVEDLRDESDHENPTRI 302
           A W  E     G  IVIT +P QV  ++L+E+IA  + A+KLP++ED+RDES  +   RI
Sbjct: 252 AKWETEDLGRGGYQIVITEIPFQVQKSRLIEKIAELLIARKLPLLEDVRDESAED--VRI 309

Query: 303 VIVPRSNRVDCDLLMNHLFASTDLEKSFRVNLNMIGLDNRPQVKGLVQILSEWISFRRET 362
           V+VP++  VD  LLM  LF  +DLE    +N+N++ L   P+V  L ++LSEW++ R++ 
Sbjct: 310 VLVPKNRTVDATLLMESLFRLSDLESRLPLNMNVLSLGKVPKVMALNEVLSEWLAHRKDV 369

Query: 363 VRSRLQYRLDKVLARLHILQGLLIAYLNLDEVIEIIRNEDDPKAVLMARFDLTDIQADAI 422
           +  R ++RL  +  RL IL GLLIAYLNLDEVI IIR ED+PK V+MAR+ LTD QA+AI
Sbjct: 370 LVRRSRHRLAAIDRRLEILGGLLIAYLNLDEVIRIIREEDEPKQVMMARWSLTDNQAEAI 429

Query: 423 LDTKLRHLAKLEEMKIRGEQDELEKERKKLEELLGSERRLNNLLKKEIKADADKFG---- 478
           L+ +LR+L KLEE +IR E D+L KE+ ++E LL S+ +    +  EI     K+     
Sbjct: 430 LNMRLRNLRKLEEFEIRKEHDDLSKEKSEIEGLLASDDKQWQTVAWEIGEVKKKYAKATE 489

Query: 479 -DDRRSPLVEREEAK-ALTERDLMPSEAITVVLSEKGWIRHAKGHDVDCQSLNYKAGDNY 536
              RR+   +  +A     ++ ++  E +T+V+S+KGWIR  KGH  D  +L +K GD  
Sbjct: 490 IGRRRTQFADAPDADIEAIQQAMIEKEPVTIVISQKGWIRALKGHMSDTSALTFKEGDGP 549

Query: 537 LTHACGKSNQQAVFLGSDGRSYSLESHTLPSARGQGEPITGRLNVAEGTTIRQVVMGEED 596
                 ++  + + L + G++Y+L +  LP  RG GEPI   +++     I    + +  
Sbjct: 550 KLAFPAQTTDKLLLLTTGGKAYTLGADKLPGGRGHGEPIRIMVDMENDQDILTAFVHDPS 609

Query: 597 QLWLVGSDAGYGFVCKGDDLLSKNRSGKALIN--LPENSEVMTPQVIADLDNDEILAITN 654
           +  L+ S  G GF+    ++++  R GK ++N  +P+ +++  P     +  D +  +  
Sbjct: 610 RKLLLVSTGGNGFIVAESEMIANTRKGKQIMNVSMPDEAKLAVP-----VTGDHVAVVGE 664

Query: 655 QGRMLLFPIKDLPQLSKGKGNKIINIPAAKAKTREEVLSNLMVLPQGASITLYAGK--RK 712
             ++L FP+  +P++S+GKG ++      + K    V      L  G S +  AG+   K
Sbjct: 665 NRKLLAFPLSQVPEMSRGKGVRL-----QRYKDGGVVDVKCFALADGLSWSDTAGRAFTK 719

Query: 713 LGLKVSDLDNFRGERGRRGALLPRGLQR 740
           +G    +L  +  +R   G  +P+G  R
Sbjct: 720 VG---EELREWLADRATVGRTVPKGFPR 744