Pairwise Alignments

Query, 761 a.a., DNA topoisomerase IV subunit A from Vibrio cholerae E7946 ATCC 55056

Subject, 739 a.a., DNA topoisomerase 4 subunit A from Acinetobacter radioresistens SK82

 Score =  874 bits (2257), Expect = 0.0
 Identities = 439/745 (58%), Positives = 560/745 (75%), Gaps = 8/745 (1%)

Query: 3   TEISFDGVEQLPLRKFTEDAYLNYSMYVIMDRALPYIGDGLKPVQRRIIYAMSELGLSAS 62
           T ++    E   + +FTE AYLNY+MYVIMDRALP+I DGLKPVQRRI+YAMSELGL  S
Sbjct: 2   TSLAHHATENRSVAEFTEQAYLNYAMYVIMDRALPHISDGLKPVQRRIVYAMSELGLKHS 61

Query: 63  AKYKKSARTVGDVLGKYHPHGDSACYEAMVLMAQPFSYRYPLVDGQGNWGAPDDPKSFAA 122
            K KKSARTVGDVLGKYHPHGDSACYEAMVLMAQPFSYRYP ++GQGNWG+PDDPKSFAA
Sbjct: 62  GKPKKSARTVGDVLGKYHPHGDSACYEAMVLMAQPFSYRYPFIEGQGNWGSPDDPKSFAA 121

Query: 123 MRYTEAKLSKFAEILLSELGQGTVDWQPNFDGTMQEPKMLPARLPHILLNGVTGIAVGMA 182
           MRYTEAKLS+++E+LLSELGQGTV+WQ NFDG+++EP  LPAR+P+IL+NG TGIAVGMA
Sbjct: 122 MRYTEAKLSQYSEVLLSELGQGTVEWQDNFDGSLKEPVTLPARVPNILMNGTTGIAVGMA 181

Query: 183 TDIPPHNVREVADATIHLIDNPNAPLTDLMQYVKGPDFPTEAEIITPTVELEKIYRSGRG 242
           TDIPPHN+REV   TI LI NPN     L +Y+ GPD PT+AEIIT   EL KI  +GRG
Sbjct: 182 TDIPPHNLREVIKGTIALIRNPNTSEAKLAEYIPGPDLPTKAEIITSKDELLKIQSTGRG 241

Query: 243 SIKMRAVWCKEGSDIVITALPHQVSGAKLLEQIAAQMRAKKLPMVEDLRDESDHENPTRI 302
           S +MRAV+  E ++I+IT LP+QVSG+K++ QIA QM+AKKLP+V DLRDESDH NPTR+
Sbjct: 242 SYRMRAVYTVEKNEIIITELPYQVSGSKIITQIADQMQAKKLPLVSDLRDESDHVNPTRL 301

Query: 303 VIVPRSNRVDCDLLMNHLFASTDLEKSFRVNLNMIGLDNRPQVKGLVQILSEWISFRRET 362
           VIV RSNRVD D +M+HLFA+TDLE S+RVNLNMIG D RPQVK + +IL EWI  R+ET
Sbjct: 302 VIVLRSNRVDADTVMSHLFATTDLESSYRVNLNMIGADGRPQVKSIRKILLEWIGIRKET 361

Query: 363 VRSRLQYRLDKVLARLHILQGLLIAYLNLDEVIEIIRNEDDPKAVLMARFDLTDIQADAI 422
           V  RLQY L+K+  RLHIL GLLIAYL++D VI IIR ED PKAVL+  F + + QA+AI
Sbjct: 362 VTRRLQYHLNKIEKRLHILAGLLIAYLDIDTVIRIIREEDHPKAVLIQTFKIDETQAEAI 421

Query: 423 LDTKLRHLAKLEEMKIRGEQDELEKERKKLEELLGSERRLNNLLKKEIKADADKFGDDRR 482
           L+ KLRHLAKL+EM+IR EQDEL      + E L +   L NL+  E+K DA KFGD+RR
Sbjct: 422 LELKLRHLAKLQEMEIRQEQDELSARAALIREQLANPESLKNLIIGELKEDAKKFGDERR 481

Query: 483 SPLVEREEAKALTERDLMPSEAITVVLSEKGWIRHAKGHDVDCQSLNYKAGDNYLTHACG 542
           SP+VERE A  + E+DL+P+E +TV+LSE GWIR AKG DVD + LNY+AGD YL+HA G
Sbjct: 482 SPIVEREGAVQMREQDLIPAEPVTVILSEAGWIRSAKGADVDAEKLNYRAGDQYLSHASG 541

Query: 543 KSNQQAVFLGSDGRSYSLESHTLPSARGQGEPITGRLNVAEGTTIRQVVMGEEDQLWLVG 602
           KSNQ+   L   GRSY+L  ++LPSARG GEP++ +L+ A G +  Q+++ E+DQ  +  
Sbjct: 542 KSNQRVYILDETGRSYALAINSLPSARGLGEPLSSKLSPANGVSFIQILVEEDDQEIIAI 601

Query: 603 SDAGYGFVCKGDDLLSKNRSGKALINLPENSEVMTPQVIADLDNDEILAITNQGRMLLFP 662
           S  GYGF  +   L +  ++GKA +++PE  + +   ++ + D   +  +T+ GR+L+ P
Sbjct: 602 SSKGYGFKTQAKQLDTNAKAGKAFLSIPEGGKAL--PLLVNPDCSHLALLTDTGRLLVLP 659

Query: 663 IKDLPQLSKGKGNKIINIPAAKAKTREEVLSNLMVLPQGASITLYAGKRKLGLKVSDLDN 722
           + +LP L+KGKGNK+I +       ++E L ++  L     I + AG++ L +K  DLD 
Sbjct: 660 VSELPSLNKGKGNKLIQL------EQDEQLLSMTTLNLNEIIQVIAGQKILNIKPGDLDK 713

Query: 723 FRGERGRRGALLPRGLQRVTAIEIE 747
           + G+R  +G LLPRG Q+V  + I+
Sbjct: 714 YLGKRASKGQLLPRGYQKVNRLLIQ 738