Pairwise Alignments

Query, 291 a.a., prepilin peptidase from Vibrio cholerae E7946 ATCC 55056

Subject, 248 a.a., peptidase A24A, prepilin type IV from Sphingobium sp. HT1-2

 Score =  129 bits (323), Expect = 9e-35
 Identities = 94/267 (35%), Positives = 135/267 (50%), Gaps = 33/267 (12%)

Query: 8   PWLFPVLATLFGLIVGSFLNVVIYRLPKIMEREWRAECAASFPEYGITPPEGKLTLSLPR 67
           PW   ++  + G I GSFL  +I R        W               P+G+  +   R
Sbjct: 4   PWA-TLVGAIAGAIAGSFLATLILR--------W---------------PQGRGVMR-GR 38

Query: 68  STCPHCQTPIRVIDNIPLLSWLALRGQCSHCKAPISARYPLIELLTALMSLVIATHFPFG 127
           S C  C   +  ID +P+LS L  RG+C  C A I   +  +E   A++   +A  F  G
Sbjct: 39  SACDGCGRLLGPIDLVPMLSALVQRGRCRTCGAAIDPLHGRVEAGCAIIG-ALALGFVPG 97

Query: 128 VFAVALLFFSYVLIAATFIDFDTLLLPDQLTLPLLWGGIALALLGFSPVSLSDAVIGAMA 187
           +  +      ++L+    +D+    LPD LTLPL + G  L L   + V+L D VIGA A
Sbjct: 98  LGGIGWALLGWLLLTLAALDWRHFWLPDALTLPLAFFGFTLGLWT-TDVALVDRVIGAAA 156

Query: 188 GYLSLWSIYWLFKLLTGKEGMGYGDFKLLAALGAWLGWQQLPVIVLLSSVVGVIFGLIQL 247
           GYL L +I   ++ L G+EG+G GD KLL A+GAWLGWQ LP I+L+++ +G+   L+ L
Sbjct: 157 GYLGLLAIGLGYRALRGREGLGLGDAKLLGAIGAWLGWQALPFILLIAASLGLAGALVAL 216

Query: 248 R--QQKKGIDMAFPFGPYLAIA---GW 269
              +  +G     P G  LAIA   GW
Sbjct: 217 ALGRAVRG-QSRVPLGTLLAIATLPGW 242