Pairwise Alignments

Query, 291 a.a., prepilin peptidase from Vibrio cholerae E7946 ATCC 55056

Subject, 269 a.a., putative peptidase (VIMSS) from Escherichia coli BW25113

 Score =  220 bits (560), Expect = 3e-62
 Identities = 120/267 (44%), Positives = 169/267 (63%), Gaps = 11/267 (4%)

Query: 2   ELFYFYPWLFPVLATLFGLIVGSFLNVVIYRLPKIMEREWRAECAASFPEYGITPPEGKL 61
           ++F  YP   PVLAT+ GLI+GSFLNVVI+R P IM R+  AE         ++  + K+
Sbjct: 4   DVFQQYPTAMPVLATVGGLIIGSFLNVVIWRYP-IMLRQQMAEFHGE-----MSSAQSKI 57

Query: 62  TLSLPRSTCPHCQTPIRVIDNIPLLSWLALRGQCSHCKAPISARYPLIELLTALMSLVIA 121
           +L+LPRS CPHCQ  IR+ DNIPL SWL L+G+C  C+A IS RYPL+ELLTAL  L+ +
Sbjct: 58  SLALPRSHCPHCQQTIRIRDNIPLFSWLMLKGRCRDCQAKISKRYPLVELLTALAFLLAS 117

Query: 122 THFPFGVFAVALLFFSYVLIAATFIDFDTLLLPDQLTLPLLWGGIALALLGFSPVSLSDA 181
             +P   + +A++  S  LIAA+ ID D   LPD  T  +LW G+  A    SP++L DA
Sbjct: 118 LVWPESGWGLAVMILSAWLIAASVIDLDHQWLPDVFTQGVLWTGLIAAWAQQSPLTLQDA 177

Query: 182 VIGAMAGYLSLWSIYWLFKLLTGKEGMGYGDFKLLAALGAWLGWQQLPVIVLLSSVVGVI 241
           V G + G+++ +S+ W+  ++  KE +G GD  L AALG W+G   LP + L++S  G+I
Sbjct: 178 VTGVLVGFITFYSLRWIAGIVLRKEALGMGDVLLFAALGGWVGALSLPNVALIASCCGLI 237

Query: 242 FGLIQLRQQKKGIDMAFPFGPYLAIAG 268
           + +I     K+G     PFGP L++ G
Sbjct: 238 YAVI----TKRG-STTLPFGPCLSLGG 259