Pairwise Alignments

Query, 408 a.a., type IV pilin assembly protein PilC from Vibrio cholerae E7946 ATCC 55056

Subject, 423 a.a., type II secretion system F family protein from Rhodanobacter sp000427505 FW510-R12

 Score =  292 bits (747), Expect = 1e-83
 Identities = 149/395 (37%), Positives = 240/395 (60%)

Query: 9   LKNYRWKGINSNGKKVSGQMLAISEIEVRDKLKDQHIQIKKLKKGSVSLLARLTHRVKSK 68
           L  Y W  ++  GK++ G M A +   V+ +L+ Q +  + +++ +  L       +K  
Sbjct: 25  LTTYEWVALDKRGKRMKGDMPAKNATLVKAELRRQGMNPQTVRERAKPLFGSTGSTIKPG 84

Query: 69  DITILTRQLATMLTTGVPIVQALKLVGDNHRKAEMKSILAQITKSVEAGTPLSKAMRTAS 128
           D+ I +RQ+ATM+ +GVP++QA  ++ D  +    K++L  + +++E G+ L +A+    
Sbjct: 85  DVAIFSRQIATMMASGVPMIQAFDIIADGQKNIRFKNVLIDVKQNIEGGSSLHEALGRYP 144

Query: 129 AHFDTLYVDLVETGEMSGNLPEVFERLATYREKSEQLRAKVIKALIYPSMVVLVALGVSY 188
             FD LY +LV+ GE SG L  V + +ATY+E++E ++ K+ KAL YP MV+ V   V  
Sbjct: 145 VQFDELYCNLVKAGEASGVLDTVLDTVATYKERTEAIKKKIKKALFYPMMVLAVVFIVVL 204

Query: 189 LMLTMVIPEFESMFKGFGAELPWFTQQVLKLSHWVQAYSLWAFIAIAAAIFGLKALRKNS 248
           +ML  V+P F   F+  GA+LP  TQ ++  S ++Q+Y       I   I  +   +K S
Sbjct: 205 IMLLFVVPVFAKTFQDAGAQLPAPTQLLVTASEFMQSYWFIVVGLIGGGIAAIVIAKKRS 264

Query: 249 FQIRLKTSRLGLKFPIIGNVLAKASIAKFSRTLATSFAAGIPILASLKTTAKTSGNVHFE 308
            +      R+ LK P++G+++  ++IA+F+RTL  +F AG+P++ ++   A  +G+V + 
Sbjct: 265 VKFAHFLDRMSLKMPVMGSIVRNSAIARFARTLGVTFRAGVPLVEAMDAVAGATGSVVYG 324

Query: 309 TAINEVYRDTAAGMPMYIAMRNTEAFPEMVLQMVMIGEESGQLDDMLNKVATIYEFEVDN 368
            A+ ++  D + G  + +AM+ T  FP MV+QM  IGEESG LD+ML KVA  YE EV N
Sbjct: 325 DAVKQMRDDISVGHQLQLAMKQTGLFPNMVVQMTAIGEESGALDNMLFKVAEFYEEEVSN 384

Query: 369 TVDNLGKILEPLIIVFLGTVVGGLVVAMYLPIFNL 403
            VD L  +LEP+I+V LGT+VGG+VVA+YLPIF L
Sbjct: 385 AVDTLSTLLEPIIMVVLGTLVGGMVVALYLPIFKL 419