Pairwise Alignments

Query, 408 a.a., type IV pilin assembly protein PilC from Vibrio cholerae E7946 ATCC 55056

Subject, 151 a.a., Type IV fimbrial assembly protein PilC from Variovorax sp. SCN45

 Score =  155 bits (393), Expect = 5e-43
 Identities = 75/151 (49%), Positives = 105/151 (69%)

Query: 257 RLGLKFPIIGNVLAKASIAKFSRTLATSFAAGIPILASLKTTAKTSGNVHFETAINEVYR 316
           R  LK P++G +L  A++A+F+RTLA +F AG+P++ +L T A  +GNV +E A+  +  
Sbjct: 1   RAMLKIPVVGQILHNAAVARFARTLAVTFRAGVPLVEALDTVAGATGNVVYEKAVYRIRD 60

Query: 317 DTAAGMPMYIAMRNTEAFPEMVLQMVMIGEESGQLDDMLNKVATIYEFEVDNTVDNLGKI 376
           D + G  + +AM+    FP MV+QM  IGEE+G LD ML KVA  YE EV+N VD L  +
Sbjct: 61  DVSVGYQVNMAMKQVNLFPHMVIQMTAIGEEAGALDTMLVKVAEFYEQEVNNAVDALSSL 120

Query: 377 LEPLIIVFLGTVVGGLVVAMYLPIFNLMSVL 407
           LEPLI++ LG +VGG+VVAMYLPIF L + +
Sbjct: 121 LEPLIMIILGVIVGGMVVAMYLPIFKLAATI 151



 Score = 47.0 bits (110), Expect = 4e-10
 Identities = 28/125 (22%), Positives = 60/125 (48%), Gaps = 1/125 (0%)

Query: 75  RQLATMLTTGVPIVQALKLVGDNHRKAEMKSILAQITKSVEAGTPLSKAMRTASAHFDTL 134
           R LA     GVP+V+AL  V         +  + +I   V  G  ++ AM+  +  F  +
Sbjct: 23  RTLAVTFRAGVPLVEALDTVAGATGNVVYEKAVYRIRDDVSVGYQVNMAMKQVNL-FPHM 81

Query: 135 YVDLVETGEMSGNLPEVFERLATYREKSEQLRAKVIKALIYPSMVVLVALGVSYLMLTMV 194
            + +   GE +G L  +  ++A + E+        + +L+ P +++++ + V  +++ M 
Sbjct: 82  VIQMTAIGEEAGALDTMLVKVAEFYEQEVNNAVDALSSLLEPLIMIILGVIVGGMVVAMY 141

Query: 195 IPEFE 199
           +P F+
Sbjct: 142 LPIFK 146