Pairwise Alignments

Query, 408 a.a., type IV pilin assembly protein PilC from Vibrio cholerae E7946 ATCC 55056

Subject, 400 a.a., putative protein secretion protein for export from Pseudomonas putida KT2440

 Score =  191 bits (485), Expect = 3e-53
 Identities = 122/395 (30%), Positives = 204/395 (51%), Gaps = 1/395 (0%)

Query: 9   LKNYRWKGINSNGKKVSGQMLAISEIEVRDKLKDQHIQIKKLKKGSVSLLARLTHRVKSK 68
           +  YR++ ++  GK     + A SE   R  L++Q +  ++L++           R+   
Sbjct: 1   MPTYRYQAVDLAGKSHKASLQADSERHARQLLREQGLFARQLQRHDAGSRQPRRQRLSRA 60

Query: 69  DITILTRQLATMLTTGVPIVQALKLVGDNHRKAEMKSILAQITKSVEAGTPLSKAMRTAS 128
            +  LTRQLAT+   G+P+V AL  +    R+  + S+L  +  S+  G  L++++    
Sbjct: 61  QLCELTRQLATLTGAGIPLVDALATLERQLRQPALHSVLVALRGSLAEGLGLARSLARQG 120

Query: 129 AHFDTLYVDLVETGEMSGNLPEVFERLATYREKSEQLRAKVIKALIYPSMVVLVALGVSY 188
           A F  LY  LVE GE SG+L +V  RLA + E+ ++ + K   ALIYP++++ V+L V  
Sbjct: 121 APFTGLYCALVEAGERSGHLAQVLTRLADHLEQVQRQQHKARTALIYPAVLMGVSLAVVI 180

Query: 189 LMLTMVIPEFESMFKGFGAELPWFTQQVLKLSHWVQAYSLWAFIAIAAAIFGLKALRKNS 248
            ++T V+P+    F   G  LP  T  ++ LS  +     W  + +A  + GL       
Sbjct: 181 GLMTFVVPKLTEQFAHAGQSLPLITSLLIGLSQGLVHAGPW-LLGVALLLGGLAGWLLRK 239

Query: 249 FQIRLKTSRLGLKFPIIGNVLAKASIAKFSRTLATSFAAGIPILASLKTTAKTSGNVHFE 308
               L+  +L L+ P IGN+L     A+ +R+LA    +G+ +L +L+   +T GN    
Sbjct: 240 PHWCLRRDQLLLRLPRIGNLLQVLESARLARSLAILCGSGVALLEALQVATETIGNRRIR 299

Query: 309 TAINEVYRDTAAGMPMYIAMRNTEAFPEMVLQMVMIGEESGQLDDMLNKVATIYEFEVDN 368
            A+ +V +    G  ++ A+  ++ FP +++ MV  GE SG L DML +VA   E     
Sbjct: 300 LAMEQVRQHVQGGTSLHRALDASQQFPPLLVNMVGSGEASGTLADMLERVADDQERGFAR 359

Query: 369 TVDNLGKILEPLIIVFLGTVVGGLVVAMYLPIFNL 403
            VD    + EPL+I+ +G VV  +V+A+ LPI  L
Sbjct: 360 QVDTAMALFEPLMILVMGAVVLFIVLAVLLPIMQL 394