Pairwise Alignments

Query, 408 a.a., type IV pilin assembly protein PilC from Vibrio cholerae E7946 ATCC 55056

Subject, 405 a.a., Type IV fimbrial assembly protein PilC from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  305 bits (781), Expect = 2e-87
 Identities = 170/397 (42%), Positives = 246/397 (61%), Gaps = 6/397 (1%)

Query: 12  YRWKGINSNGKKVSGQMLAISEIEVRDKLKDQHIQIKKLKKGSVSLLARLTHRVKSKDIT 71
           + W+G + NGK V G+  A+ E +V   L+ Q I   K+KK  +S       R+K KDI 
Sbjct: 14  FEWEGKDRNGKTVRGETRAVGENQVLAALRRQGIVPGKIKKRRMSS----GKRIKPKDIA 69

Query: 72  ILTRQLATMLTTGVPIVQALKLVGDNHRKAEMKSILAQITKSVEAGTPLSKAMRTASAHF 131
           I TRQLATM+  GVP++QA  +VG  +    +  +L  I   VE GT LS A R    +F
Sbjct: 70  IFTRQLATMMKAGVPLLQAFDIVGRGNANPSVTKLLNDIRTDVETGTSLSSAFRKHPLYF 129

Query: 132 DTLYVDLVETGEMSGNLPEVFERLATYREKSEQLRAKVIKALIYPSMVVLVALGVSYLML 191
           D+LY +LVE GE +G L ++ +RLATY EK+E L++K+  AL+YP  VV+VA  V  +++
Sbjct: 130 DSLYCNLVEAGEAAGILEDLLDRLATYMEKTEALKSKIKSALMYPIAVVIVAFVVVTIIM 189

Query: 192 TMVIPEFESMFKGFGAELPWFTQQVLKLSHWVQAYSLWAFIAIAAAI-FGLKALRKNSFQ 250
             VIP F+ +F  FGA+LP  T  V+ +S +   Y    F  +   + F ++A R+N  +
Sbjct: 190 IFVIPSFKEVFSSFGADLPAPTLAVIAMSEFFTEYWWLIFGVLGGGLYFFMQAWRRNE-K 248

Query: 251 IRLKTSRLGLKFPIIGNVLAKASIAKFSRTLATSFAAGIPILASLKTTAKTSGNVHFETA 310
           ++    RL LK PI G ++ K+ IA+++RTLAT FAAG+P++ +L +    SGN  +  A
Sbjct: 249 VQRFMDRLLLKLPIFGVLIEKSVIARWTRTLATMFAAGVPLVEALDSVGGASGNSVYTIA 308

Query: 311 INEVYRDTAAGMPMYIAMRNTEAFPEMVLQMVMIGEESGQLDDMLNKVATIYEFEVDNTV 370
             ++ ++ + G  +  AM N   FP MVLQM  IGEESG +D ML+K A  YE EVD+ V
Sbjct: 309 TEKIQQEVSTGTSLTTAMTNANVFPSMVLQMCAIGEESGSIDHMLSKAADFYESEVDDMV 368

Query: 371 DNLGKILEPLIIVFLGTVVGGLVVAMYLPIFNLMSVL 407
             +  ++EP+IIV LGTV+GG+VV+MYLPIF L  V+
Sbjct: 369 AGISSLMEPIIIVVLGTVIGGIVVSMYLPIFKLGQVV 405