Pairwise Alignments

Query, 408 a.a., type IV pilin assembly protein PilC from Vibrio cholerae E7946 ATCC 55056

Subject, 407 a.a., general secretion pathway protein F from Kangiella aquimarina DSM 16071

 Score =  200 bits (509), Expect = 6e-56
 Identities = 119/399 (29%), Positives = 216/399 (54%), Gaps = 8/399 (2%)

Query: 12  YRWKGINSNGKKVSGQMLAISEIEVRDKLKDQHIQIKKLKKGSVSLLAR-------LTHR 64
           + +  +++ GK+  G + A +  ++R +L+++ +   ++     +  AR           
Sbjct: 4   FEYVALDARGKQKKGVLEADTPRQIRQQLREKDMTPLEVVHIGDAQKAREKSSGGFFKPS 63

Query: 65  VKSKDITILTRQLATMLTTGVPIVQALKLVGDNHRKAEMKSILAQITKSVEAGTPLSKAM 124
           +K  D+ ++TRQLAT++   +PI +ALK V D   K ++KSI+  +   V  G  L+  M
Sbjct: 64  IKVADLALVTRQLATLVKAALPIEEALKAVADQTDKGKVKSIILGVRAKVLEGHTLADGM 123

Query: 125 RTASAHFDTLYVDLVETGEMSGNLPEVFERLATYREKSEQLRAKVIKALIYPSMVVLVAL 184
                 F+ LY  +V  GE +G+L +V  RLA Y E+ +++ +KV  A++YP +++LVA+
Sbjct: 124 AEFPNVFNELYRSMVAAGERAGHLDKVLNRLADYTERRQKINSKVSAAMVYPVVLILVAV 183

Query: 185 GVSYLMLTMVIPEFESMFKGFGAELPWFTQQVLKLSHWVQAYSLWAFIAIAAAIFGLKAL 244
           GV   ++   +P+    F     ELP  T+ ++ +S +V  Y L+  I +     G++  
Sbjct: 184 GVVSGLMVFAVPKVVEQFTHMSQELPVLTKILIGISDFVINYGLYVLILLILMFIGMRYW 243

Query: 245 RKNSFQIRLKTSRLGLKFPIIGNVLAKASIAKFSRTLATSFAAGIPILASLKTTAKTSGN 304
            +N    R   +++ LK P+ G + +  + A+FS TL+   ++G+P+L ++    K   N
Sbjct: 244 LRNEDNKRRWHAKI-LKMPVFGRLSSNLNTAQFSSTLSILHSSGVPLLEAMNIGGKVLSN 302

Query: 305 VHFETAINEVYRDTAAGMPMYIAMRNTEAFPEMVLQMVMIGEESGQLDDMLNKVATIYEF 364
           +    A+ E       G  + +A++ +  FP M++ M+  GE SG+L+ ML +V+   E 
Sbjct: 303 LKMRQAVKEAAIKVREGSSLKVALQQSSLFPPMMIHMIGSGEASGELEQMLQQVSDNQES 362

Query: 365 EVDNTVDNLGKILEPLIIVFLGTVVGGLVVAMYLPIFNL 403
             +N+VD    I+ PLII+ LG +V  +V+AM LPIF L
Sbjct: 363 LFENSVDVALNIMGPLIILALGGMVMFIVLAMMLPIFEL 401