Pairwise Alignments

Query, 408 a.a., type IV pilin assembly protein PilC from Vibrio cholerae E7946 ATCC 55056

Subject, 394 a.a., Type II secretory pathway, component PulF from Enterobacter asburiae PDN3

 Score =  197 bits (500), Expect = 6e-55
 Identities = 115/392 (29%), Positives = 208/392 (53%), Gaps = 11/392 (2%)

Query: 12  YRWKGINSNGKKVSGQMLAISEIEVRDKLKDQHIQIKKLKKGSVSLLARLTHRVKSKDIT 71
           +RW+ +   G+  SG + A        +L    +    L +          HR +     
Sbjct: 7   WRWRALTKEGELRSGTLWATDRTAAFTRLMRSDLHPLALTR------CAQRHRWRPHHCC 60

Query: 72  ILTRQLATMLTTGVPIVQALKLVGDNHRKAEMKSILAQITKSVEAGTPLSKAMRTASAHF 131
            + RQLAT+L  G+ +  +L+++ + H     +++L  I   +  G+P S +++   A F
Sbjct: 61  EMFRQLATLLQAGLTLSHSLQMLAEQHPLKPWQALLQSIADELSEGSPFSASLKKWPAVF 120

Query: 132 DTLYVDLVETGEMSGNLPEVFERLATYREKSEQLRAKVIKALIYPSMVVLVALGVSYLML 191
             L+V +V+TGE++G L E   +LA  ++  +QLR KV K+L YP++V+ +A+ V   M+
Sbjct: 121 SPLHVSMVKTGELTGKLEECCRQLAQQQKAQQQLREKVKKSLRYPAIVLTLAVLVVLAMV 180

Query: 192 TMVIPEFESMFKGFGAELPWFTQQVLKLSHWVQAYSLWAFIAIAAAIFGLKALRKNSFQI 251
            +V+PEF +++K F   LP  TQ V+ ++ ++++Y+L  F A+ A      ALR+N    
Sbjct: 181 ILVLPEFAAIYKTFNTPLPMLTQMVMGMAAFMRSYALALFAALLAPFATAWALRQNP--- 237

Query: 252 RLKTSRLGLKFPIIGNVLAKASIAKFSRTLATSFAAGIPILASLKTTAKTSGNVHFETAI 311
             +  R+ +  P++G +     +      L+ +  AGIP L  L++  +T  + ++   +
Sbjct: 238 --RWQRMLMHMPVMGALAKGQKLGHIFTVLSLTQQAGIPFLQGLESAEETVESCYWRGIL 295

Query: 312 NEVYRDTAAGMPMYIAMRNTEAFPEMVLQMVMIGEESGQLDDMLNKVATIYEFEVDNTVD 371
             V  D   G+P++ + +    F  + +Q++  GE SG LD ML  +A  +  +     D
Sbjct: 296 CCVREDIEKGLPVWSSFQKAAIFTPLCIQLLRTGEMSGALDIMLANLARHHTEQTFQRAD 355

Query: 372 NLGKILEPLIIVFLGTVVGGLVVAMYLPIFNL 403
           NL  +LEP++++  G ++G LVVAMYLPIF+L
Sbjct: 356 NLAALLEPVLLIVTGVIIGTLVVAMYLPIFHL 387