Pairwise Alignments

Query, 408 a.a., type IV pilin assembly protein PilC from Vibrio cholerae E7946 ATCC 55056

Subject, 401 a.a., protein transport protein HofC from Dickeya dianthicola ME23

 Score =  222 bits (566), Expect = 1e-62
 Identities = 133/400 (33%), Positives = 216/400 (54%), Gaps = 8/400 (2%)

Query: 10  KNYRWKGINSNGKKVSGQMLAISEIEVRDKLKDQHIQIKKLKKGSVSLLARLTHRV-KSK 68
           K Y W+ + S+G+  +G+ +  S  E+   L +   Q  +LK G       LT R  +  
Sbjct: 5   KLYYWQALRSDGEFCAGERIGTSRDEIYQYLLELGYQPLRLKTGQY-----LTPRYWRGP 59

Query: 69  DITILTRQLATMLTTGVPIVQALKLVGDNHRKAEMKSILAQITKSVEAGTPLSKAMRTAS 128
            ++++ RQLAT+L  G+P++ AL L+G  H KA  + +L +I   V  G  LS+ +    
Sbjct: 60  QLSVIIRQLATLLQAGLPLLDALDLLGRQHEKAGWRCLLQEIRLQVAQGRALSEVLTDYP 119

Query: 129 AHFDTLYVDLVETGEMSGNLPEVFERLATYREKSEQLRAKVIKALIYPSMVVLVALGVSY 188
             F  +   LV  GE++G L +   RLA Y+E   QL  +V+KAL YP+ V+ V L V+ 
Sbjct: 120 TVFPVMCSSLVAVGELTGKLDDCCARLANYQENQRQLTGQVMKALRYPAFVIAVGLLVAL 179

Query: 189 LMLTMVIPEFESMFKGFGAELPWFTQQVLKLSHWVQAYSLWAFIAIAAAIFGLKALRKNS 248
           LMLT+V+PEF  ++  F A LPW T+ +L LS  +  Y           + G + +R+  
Sbjct: 180 LMLTLVLPEFAGLYASFDAPLPWLTRTMLGLSDALSRYGTLLVTLPVVIVLGYRQIRRQK 239

Query: 249 FQIRLKTSRLGLKFPIIGNVLAKASIAKFSRTLATSFAAGIPILASLKTTAKTSGNVHFE 308
            + + +  RL LK P++  ++    +++   TLA +  AG+ + + L   A  +  V+ +
Sbjct: 240 VEWQKREQRLLLKLPLLSTLVRGHCLSQIFHTLAMTQQAGLTLPSGLSAAAALNNPVYRQ 299

Query: 309 TAINEVYRDTAAGMPMYIAMR-NTEAFPEMVLQMVMIGEESGQLDDMLNKVATIYEFEVD 367
           + + E+      G+P+  A+  N   +P    Q+V +GEE+G LD +  ++A  YE    
Sbjct: 300 SLV-EIKNQLEQGIPLGQAIHDNPLLYPAPCHQLVSVGEETGALDQLFARLAGWYENHTR 358

Query: 368 NTVDNLGKILEPLIIVFLGTVVGGLVVAMYLPIFNLMSVL 407
              D L + LEPL++V +G +VG LV+AMYLPIF L +VL
Sbjct: 359 QFADTLTQTLEPLLLVIVGGLVGTLVIAMYLPIFQLGNVL 398