Pairwise Alignments

Query, 408 a.a., type IV pilin assembly protein PilC from Vibrio cholerae E7946 ATCC 55056

Subject, 408 a.a., Type II secretion system protein F from Acinetobacter radioresistens SK82

 Score =  338 bits (866), Expect = 2e-97
 Identities = 180/408 (44%), Positives = 265/408 (64%), Gaps = 3/408 (0%)

Query: 1   MKATQTLPLKNYRWKGINSNGKKVSGQMLAISEIEVRDKLKDQHIQIKKLKKGSVSLLAR 60
           +K  Q +P   + + G++  G KV G++ A +    +  L+ Q I IK +++   ++L  
Sbjct: 3   VKKAQMMP--TFAYDGVDRKGIKVKGELTAKNMALAKVTLRKQGITIKTIREKRRNILEG 60

Query: 61  LTH-RVKSKDITILTRQLATMLTTGVPIVQALKLVGDNHRKAEMKSILAQITKSVEAGTP 119
           L   RV + DITI TRQLATM+  GVP+VQ  ++V +      M+ ++  I   VE G  
Sbjct: 61  LMKKRVSTLDITIFTRQLATMMKAGVPLVQGFEIVAEGLENPAMREVVLGIKAEVEGGNT 120

Query: 120 LSKAMRTASAHFDTLYVDLVETGEMSGNLPEVFERLATYREKSEQLRAKVIKALIYPSMV 179
            + A+R    +FD L+  LVE+GE SG L  + +R+A Y+EKSE L+ K+ KA+ YP+ V
Sbjct: 121 FAGALRKYPQYFDNLFCSLVESGEQSGALETMLDRVAIYKEKSELLKQKIKKAMKYPATV 180

Query: 180 VLVALGVSYLMLTMVIPEFESMFKGFGAELPWFTQQVLKLSHWVQAYSLWAFIAIAAAIF 239
           ++VA+ V+ +++  V+P F+ +F  FGA+LP FTQ V+ +S+W+Q Y     IAIAA IF
Sbjct: 181 IVVAVIVTIILMVKVVPVFQDLFSSFGADLPAFTQMVVNMSNWMQKYWFILIIAIAALIF 240

Query: 240 GLKALRKNSFQIRLKTSRLGLKFPIIGNVLAKASIAKFSRTLATSFAAGIPILASLKTTA 299
           G    +K S + R    R+ LK PI G+++ KA IA++SRTLAT+FAAG+P++ +L++TA
Sbjct: 241 GFLEAKKRSQKFRDALDRMALKLPIFGDLVYKAIIARYSRTLATTFAAGVPLIDALESTA 300

Query: 300 KTSGNVHFETAINEVYRDTAAGMPMYIAMRNTEAFPEMVLQMVMIGEESGQLDDMLNKVA 359
             + NV +E A+ ++  D A G  +  AMR +  FP M +QMV IGEESG LD ML+KVA
Sbjct: 301 GATNNVIYEQAVMKIREDVATGQQLQFAMRASNRFPPMAVQMVAIGEESGALDAMLDKVA 360

Query: 360 TIYEFEVDNTVDNLGKILEPLIIVFLGTVVGGLVVAMYLPIFNLMSVL 407
           T +E EVDN VD L  ++EPLI+  LG +VGGLV+AMYLPIF + SV+
Sbjct: 361 THFENEVDNAVDGLTSMMEPLIMAILGVLVGGLVIAMYLPIFQMGSVV 408