Pairwise Alignments

Query, 562 a.a., type IV-A pilus assembly ATPase PilB from Vibrio cholerae E7946 ATCC 55056

Subject, 577 a.a., type II secretion system ATPase GspE from Rhodanobacter sp000427505 FW510-R12

 Score =  360 bits (923), Expect = e-103
 Identities = 218/540 (40%), Positives = 321/540 (59%), Gaps = 22/540 (4%)

Query: 28  SASGTSVPEALLELSIFHAQELTEQLSHIFGLP---ETDLSRYDYANLCQQLGLRELITR 84
           SA GT +   +  L +   ++L E  + +  +P     D      A+L   L LR L  +
Sbjct: 48  SAEGT-LTALMARLGLVSERDLAEAWAELLQVPLLAARDAPELPPADL--DLSLRFLKQQ 104

Query: 85  YDALPIAKQGNLLLLAVSDPTLLQAEEEFRFATGLQVELALADHRALQAAIRRLYG--RS 142
           +  +P+    + L L V+DP      +    A G  V L +     +   I R YG  RS
Sbjct: 105 H-VVPVQDGEHGLALLVADPADPYPLQAVALAAGRPVALRVGLRSEIDGLIERYYGTGRS 163

Query: 143 IQGAANQGKEISQDELANLVKVSDDELQSIEDLSQDDSPVSRFINQVLLDAVRKGASDIH 202
             G   +  + S  E        +D+++ + DL+ + +PV R +N +L  AV + ASD+H
Sbjct: 164 AMGTIVENLDGSAAE--------EDDVEHLRDLASE-APVIRLVNLILQRAVEQRASDVH 214

Query: 203 FEPYENQYRIRLRCDGILVETQQPASHLSRRLAARIKILSKLDIAERRLPQDGRIKLRLS 262
            EP+EN+ ++R R DG+L E + P S  +  + +R+KI+++L+IAERRLPQDGRI+LR+ 
Sbjct: 215 IEPFENRLKVRYRIDGVLHEVEAPPSSSTAAVISRVKIMARLNIAERRLPQDGRIQLRV- 273

Query: 263 RDTAIDMRVSTLPTLWGEKIVLRLLDSSAANLDIDKLGYNPQQKQLYLNALKRPQGMILM 322
           +   +D+RVST+PT +GE +V+R+LD  +   D   LG+  + +Q +++ L+RP G++L+
Sbjct: 274 QGKELDLRVSTVPTSFGESVVMRILDRESVVFDFASLGFTDRFQQRFVDVLERPHGILLV 333

Query: 323 TGPTGSGKTVSLYTGLRILNTSQINISTAEDPVEINLSGINQVQVQPKIGFGFAEALRSF 382
           TGPTGSGKT +LYT L  +NT+ + I T EDPVE  L GINQ+QV+P+IG  F+ ALRS 
Sbjct: 334 TGPTGSGKTTTLYTALSRINTNDVKIITVEDPVEYQLEGINQIQVKPQIGLDFSGALRSI 393

Query: 383 LRQDPDVVMVGEIRDLETAEIAVKAAQTGHLVLSTLHTNSAAETVIRLANMGVEPFNLAS 442
           +RQDPDV+M+GE+RDLET  IA+++A TGHLVLSTLHTNSAA  + RL +MGVE + L S
Sbjct: 394 MRQDPDVIMIGEMRDLETCRIAIQSALTGHLVLSTLHTNSAAGGITRLLDMGVEDYLLGS 453

Query: 443 SLSLIIAQRLARRLCKHCKIA--VRPSALLQSQFAFQPNEILYEANAAGCNECT-GGYSG 499
           +++ I+AQRL RRL     +     P  + Q +     +E        G N     GY G
Sbjct: 454 TINGILAQRLVRRLDPETAMPYDALPEVIEQFELHKYTDERPIRLWKPGSNAANPSGYRG 513

Query: 500 RVGIYEVMAFNTELAEAIMQRASIHQIERLAKANGMQTLQESGLEKLREGITSFAELQRV 559
           R  I E +  +  L   +MQRAS   IER A++ GM+T+ E G+ K   GIT+  E+ RV
Sbjct: 514 RRAIMEFLTMSDPLRRLVMQRASEGDIERQARSEGMRTMYEDGIAKAVAGITTLEEVLRV 573