Pairwise Alignments

Query, 562 a.a., type IV-A pilus assembly ATPase PilB from Vibrio cholerae E7946 ATCC 55056

Subject, 472 a.a., general secretion pathway protein GspE from Pseudomonas simiae WCS417

 Score =  340 bits (871), Expect = 9e-98
 Identities = 210/470 (44%), Positives = 279/470 (59%), Gaps = 25/470 (5%)

Query: 93  QGNLLLLAVSDPTLLQAEEEFRFATGLQVELALADHRALQAAIRRLYGRSIQGAANQGKE 152
           QG LL +  S P    +E   +F    Q  L       L   +   Y  +   AA  G  
Sbjct: 21  QGMLLTVCPSTPGWSISEVHRQFG---QTHLEQVRDDELDGLLTSAYADTGSAAAVVGAA 77

Query: 153 ISQDELANLVKVSDDELQSIEDL--SQDDSPVSRFINQVLLDAVRKGASDIHFEPYENQY 210
            ++ +L  L++    ++  I DL  +QD +PV R IN +L  A R  ASDIH EPYE   
Sbjct: 78  ENEVDLDRLMQ----DMPEITDLLDTQDGAPVIRMINALLTQAARDEASDIHIEPYETHS 133

Query: 211 RIRLRCDGILVETQQPASHLSRRLAARIKILSKLDIAERRLPQDGRIKLRLSRDTAIDMR 270
            +R R DG L +   P   L   L +RIKI+++LDIAE+RLPQDGRI LR++    ID+R
Sbjct: 134 VVRYRVDGTLRDVVSPRKALHGALVSRIKIMAQLDIAEKRLPQDGRIALRVA-GRPIDIR 192

Query: 271 VSTLPTLWGEKIVLRLLDSSAANLDIDKLGYNPQQKQLYLNALKRPQGMILMTGPTGSGK 330
           VST+PT  GE++V+RLLD  A  L ++ LG  PQ        +++P G++L+TGPTGSGK
Sbjct: 193 VSTVPTGHGERVVMRLLDKQAGRLQLETLGMAPQLLARLDTLIRQPHGIVLVTGPTGSGK 252

Query: 331 TVSLYTGLRILNTSQINISTAEDPVEINLSGINQVQVQPKIGFGFAEALRSFLRQDPDVV 390
           T SLY  L  L+ S  NI T EDPVE +L GI+Q+QV  KI   F  ALR+ LRQDPD++
Sbjct: 253 TTSLYAALARLDASTSNILTVEDPVEYDLPGISQIQVNAKIDMTFGLALRAILRQDPDII 312

Query: 391 MVGEIRDLETAEIAVKAAQTGHLVLSTLHTNSAAETVIRLANMGVEPFNLASSLSLIIAQ 450
           M+GEIRDLETA+IAV+A+ TGHLVL+TLHTN A   V RL +MGVEPF LASSL  ++AQ
Sbjct: 313 MIGEIRDLETAQIAVQASLTGHLVLATLHTNDAVSAVNRLIDMGVEPFLLASSLLGVLAQ 372

Query: 451 RLARRLCKHCKIAVRPSALLQSQFAFQPNEILYEANAAGCNECTG-GYSGRVGIYEVMAF 509
           RL RRLC HCK    PSA       ++P          GC +C   GYSGR GI+E+   
Sbjct: 373 RLVRRLCPHCK-QEDPSA----PGTWRP---------VGCAQCNQIGYSGRTGIHELFCV 418

Query: 510 NTELAEAIMQRASIHQIERLAKANGMQTLQESGLEKLREGITSFAELQRV 559
           + ++   I Q A+   +   A+  GM +++E G   +  G T+  E+ RV
Sbjct: 419 DDDVRSLIHQGANEQDLRLAARRAGMFSMREDGERWVHSGATAPEEILRV 468