Pairwise Alignments

Query, 562 a.a., type IV-A pilus assembly ATPase PilB from Vibrio cholerae E7946 ATCC 55056

Subject, 463 a.a., General secretion pathway protein E / Type II secretion cytoplasmic ATP binding protein (PulE, ATPase) from Variovorax sp. SCN45

 Score =  332 bits (850), Expect = 3e-95
 Identities = 194/445 (43%), Positives = 265/445 (59%), Gaps = 33/445 (7%)

Query: 118 GLQVELALADHRALQAAIRRLYGRSIQGAANQGKEISQDELANLVKVSDDELQSIEDL-- 175
           G+Q    LAD    Q  I   Y +    AA    E+  D  A+L ++   EL ++EDL  
Sbjct: 46  GVQTFEVLADGPLAQR-ISAAYAQGESSAAAVVSEVQND--ADLSRMMQ-ELPAVEDLLA 101

Query: 176 SQDDSPVSRFINQVLLDAVRKGASDIHFEPYENQYRIRLRCDGILVETQQPASHLSRRLA 235
           S  D+P+ R +N +L  A R GASDIH EPYE    +R R DG L E  QP   L   L 
Sbjct: 102 SAGDAPIIRMLNALLTQAARDGASDIHIEPYERTSSVRFRIDGTLREVVQPNRALHAALI 161

Query: 236 ARIKILSKLDIAERRLPQDGRIKLRLSRDTAIDMRVSTLPTLWGEKIVLRLLDSSAANLD 295
           +R+KI++ LDI+E+RLPQDGRI LR+    A+D+RVSTLP+  GE+ VLRLLD S + L 
Sbjct: 162 SRLKIMADLDISEKRLPQDGRISLRIGT-RAVDVRVSTLPSAHGERAVLRLLDKSESKLT 220

Query: 296 IDKLGYNPQQKQLYLNALKRPQGMILMTGPTGSGKTVSLYTGLRILNTSQINISTAEDPV 355
           ++ +G        +   + +P G+IL+TGPTGSGKT +LY  L  L+ S+ NI T EDP+
Sbjct: 221 LESVGMQGDTLDRFEKLISQPHGIILVTGPTGSGKTTTLYAALARLDASRSNIMTVEDPI 280

Query: 356 EINLSGINQVQVQPKIGFGFAEALRSFLRQDPDVVMVGEIRDLETAEIAVKAAQTGHLVL 415
           E  L G+ Q Q+  KI   FA+ALR+ LRQDPDV+M+GEIRD ETA+IA++A+ TGHLVL
Sbjct: 281 EYELPGVGQTQINAKIELTFAKALRAILRQDPDVIMIGEIRDFETAQIAIQASLTGHLVL 340

Query: 416 STLHTNSAAETVIRLANMGVEPFNLASSLSLIIAQRLARRLCKHCKIAVRPSALLQSQFA 475
           +TLHTN +   V RL +MGVEPF L+SSL  ++AQRL R++C  C               
Sbjct: 341 ATLHTNDSVSAVTRLTDMGVEPFLLSSSLLGVLAQRLVRKVCTACA-------------- 386

Query: 476 FQPNEILYEANAAGCNEC-TGGYSGRVGIYEVMAFNTELAEAIMQRASIHQIERLAKANG 534
                       AGC  C   GY GR GI+E++  +  +   I  +A+  ++ +     G
Sbjct: 387 -----------GAGCEVCGQTGYQGRTGIFELLVADETVQGLIHSKAAESELLQAGARGG 435

Query: 535 MQTLQESGLEKLREGITSFAELQRV 559
           ++ ++E G   ++ GITS AEL RV
Sbjct: 436 LRLMREDGERLVQAGITSRAELLRV 460