Pairwise Alignments

Query, 562 a.a., type IV-A pilus assembly ATPase PilB from Vibrio cholerae E7946 ATCC 55056

Subject, 450 a.a., General secretion pathway protein E from Variovorax sp. SCN45

 Score =  320 bits (820), Expect = 7e-92
 Identities = 187/432 (43%), Positives = 257/432 (59%), Gaps = 20/432 (4%)

Query: 131 LQAAIRRLYGRSIQGAANQGKEISQDELANLVKVSDDELQSIEDL--SQDDSPVSRFINQ 188
           + A +   Y  +   A+  G    Q +L  L++    ++ ++ DL  +QDD+PV R IN 
Sbjct: 32  MDALLGATYAETGDAASVVGAVEQQVDLDRLMQ----DIPAVTDLLDAQDDAPVIRMINA 87

Query: 189 VLLDAVRKGASDIHFEPYENQYRIRLRCDGILVETQQPASHLSRRLAARIKILSKLDIAE 248
           +L  A R GASDIH E +E    +R R DG L +   P   L   L +RIKI+S+LDIAE
Sbjct: 88  LLAQAARDGASDIHLESFETHSVVRYRVDGTLRDVVAPRKALHAALISRIKIMSQLDIAE 147

Query: 249 RRLPQDGRIKLRLSRDTAIDMRVSTLPTLWGEKIVLRLLDSSAANLDIDKLGYNPQQKQL 308
           +RLPQDGRI LR+     ID+RVST+PT  GE+ VLRLL+  A  L +++LG  P     
Sbjct: 148 KRLPQDGRITLRVG-GRPIDVRVSTVPTAHGERAVLRLLEKDAGRLRLERLGMAPDTLAE 206

Query: 309 YLNALKRPQGMILMTGPTGSGKTVSLYTGLRILNTSQINISTAEDPVEINLSGINQVQVQ 368
               +++P G++L+TGPTGSGKT +LY  L  L+ S  NI T EDPVE +L GI Q+ V 
Sbjct: 207 LTRLVRQPHGIVLVTGPTGSGKTTTLYAALGQLDLSTSNILTVEDPVEYDLPGIGQIPVH 266

Query: 369 PKIGFGFAEALRSFLRQDPDVVMVGEIRDLETAEIAVKAAQTGHLVLSTLHTNSAAETVI 428
            KIG  F  ALR+ LRQDPD +M+GEIRDLETA+IAV+++ TGH VL++LHTN A   V 
Sbjct: 267 GKIGMTFGAALRAALRQDPDNIMIGEIRDLETAQIAVQSSLTGHGVLASLHTNDAVSAVT 326

Query: 429 RLANMGVEPFNLASSLSLIIAQRLARRLCKHCKIAVRPSALLQSQFAFQPNEILYEANAA 488
           R+ +MG+EPF L+SSL  ++AQRL R LC  CK    P         + P          
Sbjct: 327 RMTDMGIEPFLLSSSLLGVLAQRLVRCLCPACK---APQTRPDGSVVYGP---------V 374

Query: 489 GCNEC-TGGYSGRVGIYEVMAFNTELAEAIMQRASIHQIERLAKANGMQTLQESGLEKLR 547
           GC  C   G+ GR GI+E+   + ++   I +      +   A   GM++++E G   +R
Sbjct: 375 GCAACGHSGFKGRTGIHELFVVHDDVRRLIHEGGDEQAMRAAAAKRGMRSMREDGQRWVR 434

Query: 548 EGITSFAELQRV 559
           EGIT+  E+ RV
Sbjct: 435 EGITTAEEILRV 446