Pairwise Alignments

Query, 562 a.a., type IV-A pilus assembly ATPase PilB from Vibrio cholerae E7946 ATCC 55056

Subject, 503 a.a., type II secretion system protein GspE from Vibrio cholerae E7946 ATCC 55056

 Score =  363 bits (933), Expect = e-105
 Identities = 208/471 (44%), Positives = 296/471 (62%), Gaps = 23/471 (4%)

Query: 98  LLAVSDPTLLQAEEEFRFATGLQVELALADHRALQAAIRRLYGRSIQGAANQGKEISQDE 157
           L  +S   L++ +   + A  L +EL+ A+    ++ + ++Y R    A    ++I  D 
Sbjct: 43  LAPLSMEALVETKRVVKHAFQL-IELSQAE---FESKLTQVYQRDSSEARQLMEDIGAD- 97

Query: 158 LANLVKVSDD------ELQSIEDL--SQDDSPVSRFINQVLLDAVRKGASDIHFEPYENQ 209
                  SDD      EL   EDL  S+DD+P+ + IN +L +A+++GASDIH E +E  
Sbjct: 98  -------SDDFFSLAEELPQNEDLLESEDDAPIIKLINAMLGEAIKEGASDIHIETFEKT 150

Query: 210 YRIRLRCDGILVETQQPASHLSRRLAARIKILSKLDIAERRLPQDGRIKLRLSRDTAIDM 269
             IR R DG+L E   P+  LS  L +R+K+++KLDIAE+R+PQDGRI LR+    A+D+
Sbjct: 151 LSIRFRVDGVLREVLAPSRKLSSLLVSRVKVMAKLDIAEKRVPQDGRISLRIG-GRAVDV 209

Query: 270 RVSTLPTLWGEKIVLRLLDSSAANLDIDKLGYNPQQKQLYLNALKRPQGMILMTGPTGSG 329
           RVST+P+  GE++V+RLLD +A  LD+  LG        +   +KRP G+IL+TGPTGSG
Sbjct: 210 RVSTMPSSHGERVVMRLLDKNATRLDLHSLGMTAHNHDNFRRLIKRPHGIILVTGPTGSG 269

Query: 330 KTVSLYTGLRILNTSQINISTAEDPVEINLSGINQVQVQPKIGFGFAEALRSFLRQDPDV 389
           K+ +LY GL+ LN+S+ NI T EDP+E ++ GI Q QV P++   FA  LR+ LRQDPDV
Sbjct: 270 KSTTLYAGLQELNSSERNILTVEDPIEFDIDGIGQTQVNPRVDMTFARGLRAILRQDPDV 329

Query: 390 VMVGEIRDLETAEIAVKAAQTGHLVLSTLHTNSAAETVIRLANMGVEPFNLASSLSLIIA 449
           VMVGEIRDLETA+IAV+A+ TGHLV+STLHTN+A   V RL +MG+EPF ++SSL  ++A
Sbjct: 330 VMVGEIRDLETAQIAVQASLTGHLVMSTLHTNTAVGAVTRLRDMGIEPFLISSSLLGVLA 389

Query: 450 QRLARRLCKHCKIAVRPSALLQSQFAFQPNEILYEANAAGCNECT-GGYSGRVGIYEVMA 508
           QRL R LC  CK         +  F  +  E L    A GC +C   GY GR GI+E++ 
Sbjct: 390 QRLVRTLCPDCKEPYEADKEQRKLFDSKKKEPLILYRATGCPKCNHKGYRGRTGIHELLL 449

Query: 509 FNTELAEAIMQRASIHQIERLAKANGMQTLQESGLEKLREGITSFAELQRV 559
            +  L E I   A    +E+  +A    ++++ GL+K+R+GITS  E+ RV
Sbjct: 450 VDDALQELIHSEAGEQAMEKHIRAT-TPSIRDDGLDKVRQGITSLEEVMRV 499