Pairwise Alignments

Query, 562 a.a., type IV-A pilus assembly ATPase PilB from Vibrio cholerae E7946 ATCC 55056

Subject, 575 a.a., MSHA biogenesis protein MshE from Vibrio cholerae E7946 ATCC 55056

 Score =  323 bits (828), Expect = 1e-92
 Identities = 206/562 (36%), Positives = 307/562 (54%), Gaps = 29/562 (5%)

Query: 8   ILRQAELISATQEQAVVTQVSASGTSVPEALLELSIFHAQELTEQLSHIFGLPETDLSR- 66
           +L +  ++S  Q +  +     +G  + + L+ L      +L   L+    LP  DLSR 
Sbjct: 13  LLVEEGIVSEAQLEQALNAQKNTGRRLGDTLISLGFLSETQLLNFLAQQLSLPVIDLSRA 72

Query: 67  ---YDYANLCQQLGLRELITRYDALPIAKQGNLLLLAVSDPTLLQAEEEF-RFATGLQVE 122
               D   L  ++  R L     AL I + G+ L +A+SDP  L A+E           E
Sbjct: 73  HVDIDAVPLLPEVHARRL----RALVIGRSGDTLRIAMSDPADLFAQEALLNQLPDYGFE 128

Query: 123 LALADHRALQAAIRRLYGRSIQGAANQGKEISQ--DELANLVKVSDDELQSIEDLSQDDS 180
             +A  + L     R Y R+        KEI    ++L    K +D     I D   D+ 
Sbjct: 129 FVIAPEKQLVDGFDRYYRRT--------KEIVSFAEQLHAEHKTNDSFDFEITDSDSDEV 180

Query: 181 PVSRFINQVLLDAVRKGASDIHFEPYENQYRIRLRCDGILVETQQPASHLSRRLAARIKI 240
            V + IN +  DA++ GASDIH EP  N  R+R R DG+L ET     +++  L  R+K+
Sbjct: 181 TVVKLINSLFEDAIQVGASDIHIEPDANVLRLRQRIDGVLHETLLHEVNIASALVLRLKL 240

Query: 241 LSKLDIAERRLPQDGRIKLRLSRDTAIDMRVSTLPTLWGEKIVLRLLDSSAANLDIDKLG 300
           ++ LDI+E+RLPQDGR  +R+ +  ++D+R+ST+P   GE +V+RLL+ SA    +++ G
Sbjct: 241 MANLDISEKRLPQDGRFNIRV-KGQSVDIRMSTMPIQHGESVVMRLLNQSAGVRKLEESG 299

Query: 301 YNPQQKQLYLNALKRPQGMILMTGPTGSGKTVSLYTGLRILNTSQINISTAEDPVEINLS 360
             P       + LKRP GMIL+TGPTGSGKT +LY  L  LNTS   I TAEDPVE  +S
Sbjct: 300 IPPHLLLRLRHQLKRPHGMILVTGPTGSGKTTTLYGALNELNTSGKKIITAEDPVEYRIS 359

Query: 361 GINQVQVQPKIGFGFAEALRSFLRQDPDVVMVGEIRDLETAEIAVKAAQTGHLVLSTLHT 420
            INQVQV PKI   F+  LR+FLRQDPD+++VGE+RD ET EI ++AA TGHLVLSTLHT
Sbjct: 360 RINQVQVNPKINLDFSTLLRTFLRQDPDIILVGEMRDQETVEIGLRAALTGHLVLSTLHT 419

Query: 421 NSAAETVIRLANMGVEPFNLASSLSLIIAQRLARRLCKHC----KIAVRPSALLQSQFAF 476
           N A ++ +RL +MG   + +AS++  ++AQRL R++C  C    ++       L ++F  
Sbjct: 420 NDAVDSALRLIDMGAPGYLVASAVRAVVAQRLVRKVCPDCSGHDEVDEARRQWLVTRF-- 477

Query: 477 QPNEILYE-ANAAGCNECT-GGYSGRVGIYEVMAFNTELAEAIMQRASIHQIERLAKANG 534
            PN+   +     GC  C   GY GR+G++E++  +  + + +    ++   +       
Sbjct: 478 -PNQAAAKFTRGRGCQNCNLTGYRGRIGVFEMLELDQPMMDCLRANDAVAFSKAARSNTD 536

Query: 535 MQTLQESGLEKLREGITSFAEL 556
            + L  S +E   +GI S  E+
Sbjct: 537 YKPLLASAMELALQGIVSLDEV 558