Pairwise Alignments

Query, 562 a.a., type IV-A pilus assembly ATPase PilB from Vibrio cholerae E7946 ATCC 55056

Subject, 483 a.a., putative protein secretion protein for export from Pseudomonas putida KT2440

 Score =  315 bits (808), Expect = 2e-90
 Identities = 185/396 (46%), Positives = 248/396 (62%), Gaps = 7/396 (1%)

Query: 168 ELQSIEDL--SQDDSPVSRFINQVLLDAVRKGASDIHFEPYENQYRIRLRCDGILVETQQ 225
           E+  IEDL  S D++PV R IN +   A+R  ASDIH E +E    +RLR DG L E  +
Sbjct: 90  EMPRIEDLLESDDEAPVIRLINGLFGQALRLRASDIHIETFEQSLVVRLRVDGHLREVLR 149

Query: 226 PASHLSRRLAARIKILSKLDIAERRLPQDGRIKLRLSRDTAIDMRVSTLPTLWGEKIVLR 285
           P   LS  L +RIK++++LDIAE+R PQDGRI LR +    +D+RVSTLP + GE++V+R
Sbjct: 150 PPRALSAMLVSRIKVMARLDIAEKRQPQDGRITLRAA-GREVDVRVSTLPGIHGERVVMR 208

Query: 286 LLDSSAANLDIDKLGYNPQQKQLYLNALKRPQGMILMTGPTGSGKTVSLYTGLRILNTSQ 345
           +LD  A+ L +D LG      Q   + L RP G++L TGPTGSGKT +LY  L  LN   
Sbjct: 209 VLDKQASLLALDNLGMPAAVLQGLRSCLARPNGIVLSTGPTGSGKTTTLYASLNSLNDGS 268

Query: 346 INISTAEDPVEINLSGINQVQVQPKIGFGFAEALRSFLRQDPDVVMVGEIRDLETAEIAV 405
            NI T EDPVE  ++GI Q  + P+ G  FA  LR+ LRQDPDV+M+GEIRD ETA+IAV
Sbjct: 269 RNILTVEDPVEYAIAGIGQTAINPRAGLTFASGLRAILRQDPDVIMLGEIRDQETAQIAV 328

Query: 406 KAAQTGHLVLSTLHTNSAAETVIRLANMGVEPFNLASSLSLIIAQRLARRLCKHCKIAVR 465
           +A+ TGHLVLSTLHTN+A   V RL +MG+EPF +AS L  ++AQRL RRLC  C +A  
Sbjct: 329 QASLTGHLVLSTLHTNNAVGAVTRLRDMGIEPFLIASCLRGVLAQRLVRRLCS-CAVA-H 386

Query: 466 PSALLQSQFAFQPNEILYEANAAGCNECTG-GYSGRVGIYEVMAFNTELAEAIMQRASIH 524
           P    + +   +   +    +A GC +C G GY GR+G+YE +  +  L   +   AS  
Sbjct: 387 PLQAAERELWPELAALGCSYHAVGCEQCQGSGYIGRLGLYEFIELDAGLIGLLYDGASEL 446

Query: 525 QIERLAKANGMQTLQESGLEKLREGITSFAELQRVL 560
            ++    A+  Q+L     + L  G TS AE+ RV+
Sbjct: 447 AMQDYL-ADRRQSLVAMASDCLARGETSLAEVLRVV 481