Pairwise Alignments

Query, 562 a.a., type IV-A pilus assembly ATPase PilB from Vibrio cholerae E7946 ATCC 55056

Subject, 604 a.a., Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  296 bits (758), Expect = 2e-84
 Identities = 186/579 (32%), Positives = 306/579 (52%), Gaps = 32/579 (5%)

Query: 5   LVAILRQAELISATQEQAVVTQVSASGTSVPE----ALLELS------IFHAQELTEQLS 54
           LV  LR+  +ISA + +   T+ +++ +S       A++ +S      +   + L + L+
Sbjct: 23  LVGWLREDGVISAEEAERTTTRCASAHSSQHPLQRLAVVGMSRAADQHVLDVEMLAQWLA 82

Query: 55  HIFGLP--ETDLSRYDYANLCQQLGLRELITRYDALPIAKQGNLLLLAVSDPTLLQAEEE 112
              GL     D  + D   +   +       R+  LP+      +++A ++P +     E
Sbjct: 83  KRSGLEYMRIDPLKVDVGKVADVMSAA-YAERHKVLPVLVSPTEVVVATAEPFIRDWVPE 141

Query: 113 FRFATGLQVELALADHRALQAAIRRLYG--RSIQGAANQGKEISQDELANLVKVSDDELQ 170
               T   V L LA  +++++     +   +S++ A+  G          LV++     Q
Sbjct: 142 VERQTRRSVRLVLASPQSIKSFTGEFFALAKSVRAASKSGAPGGFGSFEQLVELGKANKQ 201

Query: 171 SIEDLSQDDSPVSRFINQVLLDAVRKGASDIHFEPYENQYRIRLRCDGILVETQQPASHL 230
               L  +D  V + ++ +   A  + ASDIH EP   Q  IR R DG+L    Q    +
Sbjct: 202 ----LDANDQGVVQVVDWLWQYAFDQRASDIHLEPRREQGVIRFRIDGVLHPVYQMPIGV 257

Query: 231 SRRLAARIKILSKLDIAERRLPQDGRIKLRL-----SRDTAIDMRVSTLPTLWGEKIVLR 285
              + ARIK+L ++D+ ERR PQDGRIK        +R   ++MR+STLPT +GEK+V+R
Sbjct: 258 MNAMTARIKLLGRMDVVERRRPQDGRIKTLRPGVGGARGDEVEMRLSTLPTAFGEKLVMR 317

Query: 286 LLDSSAANLDIDKLGYNPQQKQLYLNALKRPQGMILMTGPTGSGKTVSLYTGLRILNTSQ 345
           + D  +   D+  LG+     Q +    + P G++L+TGPTGSGKT +LY  L+ L T +
Sbjct: 318 IFDPESTVKDLSALGFAAHDAQRWEGLTRHPHGIVLVTGPTGSGKTTTLYATLKRLATEE 377

Query: 346 INISTAEDPVEINLSGINQVQVQPKIGFGFAEALRSFLRQDPDVVMVGEIRDLETAEIAV 405
           +N+ST EDP+E+     NQ QV P +   FA+ LRS +RQDPD++MVGE+RDL TAE+AV
Sbjct: 378 VNVSTVEDPIEMIEPAFNQTQVLPHLDLDFAQGLRSLMRQDPDIIMVGEVRDLATAEMAV 437

Query: 406 KAAQTGHLVLSTLHTNSAAETVIRLANMGVEPFNLASSLSLIIAQRLARRLCKHCK---- 461
           +AA TGHLV +TLHTN A   ++RL  +G+ P+ + +++  ++AQRL R LC  C+    
Sbjct: 438 QAALTGHLVFTTLHTNDAPSAIMRLMELGIPPYLINATVLGVLAQRLVRTLCPACRKPQD 497

Query: 462 ---IAVRPSALLQSQFAFQPNEILYEANAAGCNEC-TGGYSGRVGIYEVMAFNTELAEAI 517
                   +AL +    +Q +       A GC +C   G+ GR+G+YE++       + +
Sbjct: 498 ADETTASRAALAELVKPWQVSGSYRPYQAVGCVDCRMTGFRGRMGLYELLTVTEAFKDKV 557

Query: 518 MQRASIHQIERLAKANGMQTLQESGLEKLREGITSFAEL 556
            +   +  + R A  +GM+ L+ +G  ++ EG+T+  E+
Sbjct: 558 SREPVLDALRRQAVQDGMRPLRLAGAARVAEGLTTMDEV 596