Pairwise Alignments

Query, 562 a.a., type IV-A pilus assembly ATPase PilB from Vibrio cholerae E7946 ATCC 55056

Subject, 561 a.a., Predicted secretion system X protein GspE-like from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  294 bits (753), Expect = 5e-84
 Identities = 188/496 (37%), Positives = 275/496 (55%), Gaps = 18/496 (3%)

Query: 74  QQLGLRELITRYDALPIAKQGNLLLLAVSDP--TLLQAEEEFRFATGLQVELALADHRAL 131
           ++L   E + R   L   ++   L L +++P  T L A  E R    LQV LA   HRA 
Sbjct: 74  ERLPYGEAVQRECLLMHGEEAPDLCLVIANPFDTDLLAWAEERVRQPLQVRLA---HRA- 129

Query: 132 QAAIRRLYGRSIQGAANQGKEISQDELANLVKVSDDELQSIEDLSQDDSPVSRFINQVLL 191
              I     R   G           + A   +  +D   S+  +S+D SPV R +N  L 
Sbjct: 130 --DIEAYLARHEDGLRAMDSLAPMQQAAAAGEGLEDI--SLRSISEDSSPVVRLVNSTLY 185

Query: 192 DAVRKGASDIHFEPYENQYRIRLRCDGILVETQQ-PASHLSRRLAARIKILSKLDIAERR 250
           DA++ GASDIH E       I+ R DG+L        S  + ++ +RIK++++LDIAERR
Sbjct: 186 DALKAGASDIHLETAGGGITIKYRIDGVLAGVGGIHGSENAEQVISRIKVMAELDIAERR 245

Query: 251 LPQDGRIKLRLSRDTAIDMRVSTLPTLWGEKIVLRLLDSS-----AANLDIDKLGYNPQQ 305
           +PQDGR K+  +   AID+RVS +P++ GE  VLR+LD          L ++ LG++ + 
Sbjct: 246 VPQDGRFKVA-ALGRAIDIRVSIMPSIHGEDAVLRVLDKERLSDQVTGLRLEALGFDAET 304

Query: 306 KQLYLNALKRPQGMILMTGPTGSGKTVSLYTGLRILNTSQINISTAEDPVEINLSGINQV 365
            +      + P GM+L TGPTGSGKT +LY  +  +N     I T EDPVE  L+G+ Q+
Sbjct: 305 MRSLRALCQEPYGMLLATGPTGSGKTTTLYAAINEINHGHDKIVTIEDPVEYQLAGVLQI 364

Query: 366 QVQPKIGFGFAEALRSFLRQDPDVVMVGEIRDLETAEIAVKAAQTGHLVLSTLHTNSAAE 425
            V  K G  FA  LRS LR DPD +MVGEIRD ETA+IAV+AA TGHLVL+T+H N+  +
Sbjct: 365 PVNEKKGLTFARGLRSILRHDPDKIMVGEIRDGETAQIAVQAALTGHLVLTTVHANNVFD 424

Query: 426 TVIRLANMGVEPFNLASSLSLIIAQRLARRLCKHCKIAVRPSALLQSQFAFQPNEILYEA 485
            + R  +MGV+P++L ++L+ I+AQRL R  C  C +   P+  L +    +     +  
Sbjct: 425 VLGRFTHMGVDPYSLVAALNGIVAQRLVRVNCPDCAVDDVPTPELLADSGLRDVSGFHFR 484

Query: 486 NAAGCNECTG-GYSGRVGIYEVMAFNTELAEAIMQRASIHQIERLAKANGMQTLQESGLE 544
              GC  C G G+ GR  + EV+  + EL E I+ R  + +I+ +A   G + L++ GL+
Sbjct: 485 AGRGCASCRGTGFKGRKAVAEVLLLDDELREMIVTREPVRRIKEVAHQKGTRVLRDVGLD 544

Query: 545 KLREGITSFAELQRVL 560
            +R G ++  EL RV+
Sbjct: 545 LVRRGESTLQELNRVV 560