Pairwise Alignments

Query, 562 a.a., type IV-A pilus assembly ATPase PilB from Vibrio cholerae E7946 ATCC 55056

Subject, 493 a.a., general secretory pathway component, cryptic (NCBI) from Escherichia coli BW25113

 Score =  349 bits (895), Expect = e-100
 Identities = 200/416 (48%), Positives = 268/416 (64%), Gaps = 8/416 (1%)

Query: 149 QGKEISQD--ELANLVKVSDDELQSIEDLSQDDS--PVSRFINQVLLDAVRKGASDIHFE 204
           + ++I+QD  +  +L+ +S+ E+ + EDL  +DS  PV R IN +L +A+++ ASDIH E
Sbjct: 72  ESQQIAQDIDQSVDLLSLSE-EMPANEDLLNEDSAAPVIRLINAILSEAIKETASDIHIE 130

Query: 205 PYENQYRIRLRCDGILVETQQPASHLSRRLAARIKILSKLDIAERRLPQDGRIKLRLSRD 264
            YE    IR R DG+L    QP   L+  L +RIK++++LDIAE+R+PQDGRI LR+ R 
Sbjct: 131 TYEKTMSIRFRIDGVLRTILQPNKKLAALLISRIKVMARLDIAEKRIPQDGRISLRIGRR 190

Query: 265 TAIDMRVSTLPTLWGEKIVLRLLDSSAANLDIDKLGYNPQQKQLYLNALKRPQGMILMTG 324
             ID+RVSTLP+++GE+ VLRLLD ++  L ++ LG     KQ   N ++ P G+IL+TG
Sbjct: 191 N-IDVRVSTLPSIYGERAVLRLLDKNSLQLSLNNLGMTAADKQDLENLIQLPHGIILVTG 249

Query: 325 PTGSGKTVSLYTGLRILNTSQINISTAEDPVEINLSGINQVQVQPKIGFGFAEALRSFLR 384
           PTGSGK+ +LY  L  LNT   NI T EDPVE  L GI Q QV  ++   FA  LR+ LR
Sbjct: 250 PTGSGKSTTLYAILSALNTPGRNILTVEDPVEYELEGIGQTQVNTRVDMSFARGLRAILR 309

Query: 385 QDPDVVMVGEIRDLETAEIAVKAAQTGHLVLSTLHTNSAAETVIRLANMGVEPFNLASSL 444
           QDPDVVMVGEIRD ETA+IAV+A+ TGHLVLSTLHTNSA+  V RL +MGVE F L+SSL
Sbjct: 310 QDPDVVMVGEIRDTETAQIAVQASLTGHLVLSTLHTNSASGAVTRLRDMGVESFLLSSSL 369

Query: 445 SLIIAQRLARRLCKHCKIAVRPSALLQSQFAFQPNEILYEANAAGCNEC-TGGYSGRVGI 503
           + IIAQRL RRLC  C+     S      F +    +       GC  C   GY GR+ I
Sbjct: 370 AGIIAQRLVRRLCPQCRQFTPVSPQQAQMFKYHQLAVTTIGTPVGCPHCHQSGYQGRMAI 429

Query: 504 YEVMAFNTELAEAIMQRASIHQIERLAKANGMQTLQESGLEKLREGITSFAELQRV 559
           +E+M    EL  AI +      +ERL +    + L ++GL+K+  G TS+ E+ RV
Sbjct: 430 HEMMVVTPELRAAIHENVDEQALERLVRQQ-HKALIKNGLQKVISGDTSWDEVMRV 484