Pairwise Alignments

Query, 562 a.a., type IV-A pilus assembly ATPase PilB from Vibrio cholerae E7946 ATCC 55056

Subject, 461 a.a., conserved protein with nucleoside triphosphate hydrolase domain (NCBI) from Escherichia coli BW25113

 Score =  342 bits (878), Expect = 1e-98
 Identities = 181/386 (46%), Positives = 249/386 (64%), Gaps = 4/386 (1%)

Query: 175 LSQDDSPVSRFINQVLLDAVRKGASDIHFEPYENQYRIRLRCDGILVETQQPASHLSRRL 234
           + +   P +  + + L  A+ + ASDIH EP +N YRIRLR DG+L      +      L
Sbjct: 74  VQEKHQPKAELLTRTLQSALEQRASDIHIEPADNAYRIRLRIDGVLHPLPDVSPDAGVAL 133

Query: 235 AARIKILSKLDIAERRLPQDGRIKLRLSRDTAIDMRVSTLPTLWGEKIVLRLLDSSAANL 294
            AR+K+L  LDIAE RLPQDG+  + L+ + A+  R++TLP   GEK+VLRLL      L
Sbjct: 134 TARLKVLGNLDIAEHRLPQDGQFTVELAGN-AVSFRIATLPCRGGEKVVLRLLQQVGQAL 192

Query: 295 DIDKLGYNPQQKQLYLNALKRPQGMILMTGPTGSGKTVSLYTGLRILNTSQINISTAEDP 354
           D++ LG  P Q   + +AL++PQG++L+TGPTGSGKTV+LY+ L+ LNT+ INI + EDP
Sbjct: 193 DVNTLGMQPLQLADFAHALQQPQGLVLVTGPTGSGKTVTLYSALQKLNTADINICSVEDP 252

Query: 355 VEINLSGINQVQVQPKIGFGFAEALRSFLRQDPDVVMVGEIRDLETAEIAVKAAQTGHLV 414
           VEI ++G+NQ Q+ P+ G  F   LR+ LRQDPDV+M+GEIRD ETAEIA+KAAQTGHLV
Sbjct: 253 VEIPIAGLNQTQIHPRAGLTFQGVLRALLRQDPDVIMIGEIRDGETAEIAIKAAQTGHLV 312

Query: 415 LSTLHTNSAAETVIRLANMGVEPFNLASSLSLIIAQRLARRLCKHCKIAVRPSALLQSQF 474
           LSTLHTNS  ET++RL  MGV  + L+S+L+L+IAQRL R+LC HC+        +    
Sbjct: 313 LSTLHTNSTCETLVRLQQMGVARWMLSSALTLVIAQRLVRKLCPHCRRQQGEPIHIPDNV 372

Query: 475 AFQPNEILYEANAAGCNECTGGYSGRVGIYEVMAFNTELAEAIMQRASIHQIERLAKANG 534
              P   L    A GC  C  G+ GR  ++EV+     + + I     +  +E  A+  G
Sbjct: 373 WPSP---LPHWQAPGCVHCYHGFYGRTALFEVLPITPVIRQLISANTDVESLETHARQAG 429

Query: 535 MQTLQESGLEKLREGITSFAELQRVL 560
           M+TL E+G   + +G+T+F EL RVL
Sbjct: 430 MRTLFENGCLAVEQGLTTFEELIRVL 455