Pairwise Alignments

Query, 562 a.a., type IV-A pilus assembly ATPase PilB from Vibrio cholerae E7946 ATCC 55056

Subject, 587 a.a., Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB from Kangiella aquimarina DSM 16071

 Score =  312 bits (800), Expect = 2e-89
 Identities = 188/531 (35%), Positives = 304/531 (57%), Gaps = 20/531 (3%)

Query: 42  SIFHAQELTEQLSHIFGLP--ETDLSRYDYANLCQQLGLRELITRYDALPIA--KQGNLL 97
           SI   + LT+ ++ ++ LP  + D  + D   + + + L     R++ L I   K   ++
Sbjct: 58  SIIDEELLTQFVAKLYKLPYEKIDPLKIDVDGVTRVMSLA-YAQRHNILVIHVDKDAEVV 116

Query: 98  LLAVSDPTLLQAEEEFRFATGLQVELALADHRALQAAIRRLY--GRSIQGAANQGKEISQ 155
            +AV  P  L   E       +++   + +   ++   +  Y    S++GA N  K    
Sbjct: 117 KVAVMYPEDLSWRESLEQVLRMKIMPVMGNPALIKRYQKEFYLLSASVKGA-NDIKLQKD 175

Query: 156 DELANLVKVSDDELQSIEDLSQDDSPVSRFINQVLLDAVRKGASDIHFEPYENQYRIRLR 215
           + + NL ++   EL+  E+   +D  + + ++ +L  A ++ ASDIH EP     RIR R
Sbjct: 176 NTVTNLEQLI--ELKGAEEADANDQHIVQIVDWLLQYAFKERASDIHIEPRREVGRIRFR 233

Query: 216 CDGILVETQQPASHLSRRLAARIKILSKLDIAERRLPQDGRIKLRLSRDTAIDMRVSTLP 275
            DG+L +  +    ++  + +R+KIL ++D+AERR P DGR+K +    + I++R+STLP
Sbjct: 234 IDGVLHKVYELPISITHAVISRLKILGRMDLAERRKPLDGRVKTKSPDGSEIELRLSTLP 293

Query: 276 TLWGEKIVLRLLDSSAANLDIDKLGYNPQQKQLYLNALKRPQGMILMTGPTGSGKTVSLY 335
           T +GEK V R+ D +    + D+LG   + +  + + + +P G++L+TGPTGSGKT +LY
Sbjct: 294 TAFGEKFVGRIFDPTVLTRNFDELGLEAETEATWRDLISQPTGIVLLTGPTGSGKTTTLY 353

Query: 336 TGLRILNTSQINISTAEDPVEINLSGINQVQVQPKIGFGFAEALRSFLRQDPDVVMVGEI 395
           T L++L T ++NI T EDP+E+    +NQ+QV   I   FA  +R+ LRQDPD++M+GEI
Sbjct: 354 TSLKLLATPEVNICTIEDPIEMVDPNLNQMQVHHDIDLDFAAGVRALLRQDPDIIMIGEI 413

Query: 396 RDLETAEIAVKAAQTGHLVLSTLHTNSAAETVIRLANMGVEPFNLASSLSLIIAQRLARR 455
           RD ETA++AV+AA TGHLV+STLHTN A   + RL  +GVEP+ L +++  ++AQRL R 
Sbjct: 414 RDKETAQMAVQAALTGHLVISTLHTNDAPSAMTRLIEIGVEPYLLNATMLGVMAQRLVRT 473

Query: 456 LCKHCKIAVRPSALL------QSQFAFQPNEILYEANAAGCNECT-GGYSGRVGIYEVMA 508
           LCK+CK  V    L       ++Q    P +I +     GC+ C   GY GR GIYE++ 
Sbjct: 474 LCKYCKEEVSTDPLAWKAMVGENQKVPMPEKIFH---PVGCDRCRHTGYQGRQGIYELLK 530

Query: 509 FNTELAEAIMQRASIHQIERLAKANGMQTLQESGLEKLREGITSFAELQRV 559
              +L   + + A I Q+ +    +GM  L+ SG  K+  G+T+  E+ RV
Sbjct: 531 VTDDLKTLVYEGAQIRQLRKQGIEDGMNLLRVSGAYKVAAGLTTIDEVLRV 581