Pairwise Alignments

Query, 562 a.a., type IV-A pilus assembly ATPase PilB from Vibrio cholerae E7946 ATCC 55056

Subject, 414 a.a., type II/IV secretion system protein from Fusobacterium nucleatum SB010

 Score =  295 bits (756), Expect = 2e-84
 Identities = 160/396 (40%), Positives = 248/396 (62%), Gaps = 13/396 (3%)

Query: 169 LQSIEDLS-QDDSPVSRFINQVLLDAVRKGASDIHFEPYENQYRIRLRCDGILVETQQPA 227
           ++ IE+L  +++   ++ I  +LL+A++  ASDIH E   ++ RIR R +GIL E  +  
Sbjct: 28  IEDIEELFIRENVNSNKGIFSILLEAIKFSASDIHIEALTDKIRIRYRINGILKEVAEID 87

Query: 228 SHLSRRLAARIKILSKLDIAERRLPQDGRIKLRLSRDTAIDMRVSTLPTLWGEKIVLRLL 287
                 + +++KILS LDI E+R PQDGR  LR  +   ID R S +PT+ GEKIV+R+L
Sbjct: 88  KTFLSSIVSKLKILSSLDIVEKRKPQDGRFSLRY-KGREIDFRTSIIPTMNGEKIVIRIL 146

Query: 288 DSSAANLDIDKLGYNPQQKQLYLNALKRPQGMILMTGPTGSGKTVSLYTGLRILNTSQIN 347
           D    N  ++ L  + + K+++  A+ +  G+IL+ GPTGSGK+ +LY+ L+  N  ++N
Sbjct: 147 DKFNYNFTLEDLYLSEENKKIFYKAINQNTGIILVNGPTGSGKSSTLYSILKYKNREEVN 206

Query: 348 ISTAEDPVEINLSGINQVQVQPKIGFGFAEALRSFLRQDPDVVMVGEIRDLETAEIAVKA 407
           IST EDP+E  + GINQVQ + +IG GF+  LR+ LRQDPD++MVGEIRD ETAEIAVKA
Sbjct: 207 ISTVEDPIEYQIEGINQVQCRNEIGLGFSTILRALLRQDPDILMVGEIRDRETAEIAVKA 266

Query: 408 AQTGHLVLSTLHTNSAAETVIRLANMGVEPFNLASSLSLIIAQRLARRLCKHCKIAVR-- 465
           + TGHLV STLH+N +   + RL N+G++ + L+  L ++++QRL R+LC HCK      
Sbjct: 267 SLTGHLVFSTLHSNDSLGCINRLVNLGIDGYLLSLVLQMVVSQRLVRKLCPHCKKEDENY 326

Query: 466 PSALLQSQFAFQPNEILYEANAAGCNECTG-GYSGRVGIYEVMAFNTELAEAIMQRASIH 524
              L     + +  + +    + GC +C G GY GR+ ++E++ F+  L + + Q+  + 
Sbjct: 327 KEKLKSLNLSEEKYKDIKFYTSGGCEKCMGTGYIGRIPVFEIIYFDDILKDMLAQKKELK 386

Query: 525 QIERLAKANGMQTLQESGLEKLREGITSFAELQRVL 560
           Q          +TL +  ++K +EG+TS  E+ R L
Sbjct: 387 Q--------NFKTLLDDAMDKAKEGLTSLDEIMRQL 414