Pairwise Alignments

Query, 562 a.a., type IV-A pilus assembly ATPase PilB from Vibrio cholerae E7946 ATCC 55056

Subject, 473 a.a., type II secretion system protein GspE from Dickeya dianthicola ME23

 Score =  349 bits (896), Expect = e-100
 Identities = 190/383 (49%), Positives = 248/383 (64%), Gaps = 4/383 (1%)

Query: 178 DDSPVSRFINQVLLDAVRKGASDIHFEPYENQYRIRLRCDGILVETQQPASHLSRRLAAR 237
           DD+PV +FINQ L  A+++ ASDIHFEP    YR+RLR DG+L ET      L+ RL AR
Sbjct: 90  DDAPVVQFINQTLKLAIQRRASDIHFEPLPAGYRVRLRIDGVLHETPSAPDSLAGRLIAR 149

Query: 238 IKILSKLDIAERRLPQDGRIKLRLSRDTAIDMRVSTLPTLWGEKIVLRLLDSSAANLDID 297
           +KI+ KL+IAERRLPQDG+  LRL +  A  +R++TLP   GEK+VLR+L +    L++D
Sbjct: 150 LKIMGKLNIAERRLPQDGQFSLRLDQH-AYSLRIATLPVQGGEKVVLRVLQTQQQALELD 208

Query: 298 KLGYNPQQKQLYLNALKRPQGMILMTGPTGSGKTVSLYTGLRILNTSQINISTAEDPVEI 357
            LG   +  Q +  AL  PQG+IL+TGPTGSGKT +LY+ +R LN    NI + EDP+EI
Sbjct: 209 ALGLPARALQQFKQALSLPQGLILVTGPTGSGKTFTLYSAIRWLNDVSRNICSVEDPIEI 268

Query: 358 NLSGINQVQVQPKIGFGFAEALRSFLRQDPDVVMVGEIRDLETAEIAVKAAQTGHLVLST 417
            L+GINQ  +       FA  LR+ LRQDPDV+M+GEIRD ETAEIAVKAAQTGHLVLST
Sbjct: 269 PLAGINQTAIHAPSQLDFARVLRALLRQDPDVIMIGEIRDAETAEIAVKAAQTGHLVLST 328

Query: 418 LHTNSAAETVIRLANMGVEPFNLASSLSLIIAQRLARRLCKHCKIAVRPSALLQSQFAFQ 477
           LHTNSAA+T++RL ++G+  + LA++L L+IAQRL RRLC HC+     +  L       
Sbjct: 329 LHTNSAADTLVRLGHLGIPGYLLAAALKLVIAQRLVRRLCPHCRQLTEDAVTLPDNLWQG 388

Query: 478 PNEILYEANAAGCNECTGGYSGRVGIYEVMAFNTELAEAIMQRASIHQIERLAKANGMQT 537
           P   L +  A GC  C  GY GR  +YE++     L +A+   AS     +         
Sbjct: 389 P---LRQWRATGCEHCFSGYYGRAALYELLPVTPALQQALSGSASWSDNSQPLPLQRGTG 445

Query: 538 LQESGLEKLREGITSFAELQRVL 560
           L  +GL  + EGITS  E+ RV+
Sbjct: 446 LLSAGLVLVHEGITSLEEVYRVV 468