Pairwise Alignments

Query, 562 a.a., type IV-A pilus assembly ATPase PilB from Vibrio cholerae E7946 ATCC 55056

Subject, 498 a.a., type II secretion system ATPase GspE from Dickeya dianthicola ME23

 Score =  334 bits (857), Expect = 4e-96
 Identities = 194/453 (42%), Positives = 275/453 (60%), Gaps = 14/453 (3%)

Query: 112 EFRFATGLQVELALADHRALQAAIRRLYGRSIQGAANQGKEISQD----ELANLVKVSDD 167
           E R   G+ + ++       +  +   Y R  + A    ++I  D     LA  +  SDD
Sbjct: 51  EARRVAGVPLTVSQVSPEEFERQLVMRYQRDSEEARRLMEDIGNDIDFYTLAEELPDSDD 110

Query: 168 ELQSIEDLSQDDSPVSRFINQVLLDAVRKGASDIHFEPYENQYRIRLRCDGILVETQQPA 227
            L       +DD+P+ R IN +L +A++  ASDIH E +E    IR R DG+L E  +P 
Sbjct: 111 LLDG-----EDDAPIIRLINAMLTEAIKHKASDIHIETFERHLLIRFRIDGVLREILRPQ 165

Query: 228 SHLSRRLAARIKILSKLDIAERRLPQDGRIKLRLSRDTAIDMRVSTLPTLWGEKIVLRLL 287
             L+  L +RIK+++KLDIAE+R+PQDGR+ LR+    AID+RVSTLP+ +GE++VLRLL
Sbjct: 166 RQLASLLVSRIKVMAKLDIAEKRVPQDGRMALRIG-GRAIDVRVSTLPSNYGERVVLRLL 224

Query: 288 DSSAANLDIDKLGYNPQQKQLYLNALKRPQGMILMTGPTGSGKTVSLYTGLRILNTSQIN 347
           D ++  LD++ LG     ++     + RP G+IL+TGPTGSGK+ +LY  L  LN+++ N
Sbjct: 225 DKNSVRLDLETLGMAEHHRRQVDTLIHRPHGIILVTGPTGSGKSTTLYAALSRLNSAERN 284

Query: 348 ISTAEDPVEINLSGINQVQVQPKIGFGFAEALRSFLRQDPDVVMVGEIRDLETAEIAVKA 407
           I T EDP+E  L GI Q QV PK+   FA  LR+ LRQDPDVV+VGEIRD ETA+IAV+A
Sbjct: 285 IMTVEDPIEYELEGIGQTQVNPKVDMTFARGLRAILRQDPDVVLVGEIRDGETAQIAVQA 344

Query: 408 AQTGHLVLSTLHTNSAAETVIRLANMGVEPFNLASSLSLIIAQRLARRLCKHCKIAVRPS 467
           + TGHLVLSTLHTNSA   + RL +MG+EPF L++SL  ++AQRL R LC  C+      
Sbjct: 345 SLTGHLVLSTLHTNSALGALSRLQDMGIEPFLLSTSLLGVLAQRLVRTLCPSCRQPYVID 404

Query: 468 ALLQSQFAFQPNEILYEANAAGCNECT-GGYSGRVGIYEVMAFNTELAEAIMQRASIHQI 526
                Q        LY  +  GC +C   GY GR GI+E++  +  +  AI    S   I
Sbjct: 405 DEQAKQTGLAAGTTLY--HPGGCEKCNYSGYRGRTGIHELLLIDDVVRTAIHSGESELGI 462

Query: 527 ERLAKANGMQTLQESGLEKLREGITSFAELQRV 559
            R+   +   T+++ GL+K+  G+T++ E+ RV
Sbjct: 463 ARML-GDKRVTIRQDGLDKVLAGVTTWEEVVRV 494