Pairwise Alignments

Query, 562 a.a., type IV-A pilus assembly ATPase PilB from Vibrio cholerae E7946 ATCC 55056

Subject, 498 a.a., type II secretion system ATPase GspE from Dickeya dianthicola 67-19

 Score =  337 bits (863), Expect = 9e-97
 Identities = 197/461 (42%), Positives = 280/461 (60%), Gaps = 18/461 (3%)

Query: 104 PTLLQAEEEFRFATGLQVELALADHRALQAAIRRLYGRSIQGAANQGKEISQD----ELA 159
           P LL+A    R   G+ + ++       +  +   Y R  + A    ++I  D     LA
Sbjct: 47  PALLEA----RRVAGVPLTVSQVSPEEFERQLVMRYQRDSEEARRLMEDIGNDIDFYTLA 102

Query: 160 NLVKVSDDELQSIEDLSQDDSPVSRFINQVLLDAVRKGASDIHFEPYENQYRIRLRCDGI 219
             +  SDD L       +DD+P+ R IN +L +A++  ASDIH E +E    IR R DG+
Sbjct: 103 EELPDSDDLLDG-----EDDAPIIRLINAMLTEAIKHKASDIHIETFERHLLIRFRIDGV 157

Query: 220 LVETQQPASHLSRRLAARIKILSKLDIAERRLPQDGRIKLRLSRDTAIDMRVSTLPTLWG 279
           L E  +P   L+  L +RIK+++KLDIAE+R+PQDGR+ LR+    AID+RVSTLP+ +G
Sbjct: 158 LREILRPQRQLASLLVSRIKVMAKLDIAEKRVPQDGRMALRIG-GRAIDVRVSTLPSNYG 216

Query: 280 EKIVLRLLDSSAANLDIDKLGYNPQQKQLYLNALKRPQGMILMTGPTGSGKTVSLYTGLR 339
           E++VLRLLD ++  LD++ LG     ++     + RP G+IL+TGPTGSGK+ +LY  L 
Sbjct: 217 ERVVLRLLDKNSVRLDLETLGMAEHHRRQLDTLINRPHGIILVTGPTGSGKSTTLYAALS 276

Query: 340 ILNTSQINISTAEDPVEINLSGINQVQVQPKIGFGFAEALRSFLRQDPDVVMVGEIRDLE 399
            LN+++ NI T EDP+E  L GI Q QV PK+   FA  LR+ LRQDPDVV+VGEIRD E
Sbjct: 277 RLNSAERNIMTVEDPIEYELEGIGQTQVNPKVDMTFARGLRAILRQDPDVVLVGEIRDGE 336

Query: 400 TAEIAVKAAQTGHLVLSTLHTNSAAETVIRLANMGVEPFNLASSLSLIIAQRLARRLCKH 459
           TA+IAV+A+ TGHLVLSTLHTNSA   + RL +MG+EPF L++SL  ++AQRL R LC  
Sbjct: 337 TAQIAVQASLTGHLVLSTLHTNSALGALSRLQDMGIEPFLLSTSLLGVLAQRLVRTLCPS 396

Query: 460 CKIAVRPSALLQSQFAFQPNEILYEANAAGCNECT-GGYSGRVGIYEVMAFNTELAEAIM 518
           C+     +     Q        LY  +  GC +C   GY GR GI+E++  +  +  AI 
Sbjct: 397 CRQPYVINDEQAKQTGLAAGTTLY--HPGGCEKCNYSGYRGRTGIHELLLIDDAVRTAIH 454

Query: 519 QRASIHQIERLAKANGMQTLQESGLEKLREGITSFAELQRV 559
              S   I R+   +   T+++ GL+K+  G+T++ E+ RV
Sbjct: 455 SGESELGIARML-GDKRVTIRQDGLDKVLAGVTTWEEVVRV 494