Pairwise Alignments

Query, 181 a.a., 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD from Vibrio cholerae E7946 ATCC 55056

Subject, 256 a.a., N-acetylmuramoyl-L-alanine amidase from Rhodanobacter sp000427505 FW510-R12

 Score = 74.3 bits (181), Expect = 2e-18
 Identities = 57/168 (33%), Positives = 75/168 (44%), Gaps = 20/168 (11%)

Query: 10  LARKVPSPHCDVRHDSEDISLLVVHNISLPPGQFGGPYIEQFFLGELDANQHSFFKVIAK 69
           LA  VPSP+ D+R       L+V+H              +Q     LD  + S     + 
Sbjct: 35  LATWVPSPNHDIRRPV----LIVLHYTQ-----------QQSVQQSLDTLRSSN----SM 75

Query: 70  MRVSAHCVIRRDGEVVQFVPFHLRAWHAGVSSFAGRAKCNDYSIGIELEGSDFVPYTDAQ 129
             VSAH +I  DG + Q VP   RAW AG   +      N  SIGIEL+     P+   Q
Sbjct: 76  GPVSAHYLIGADGHIYQLVPDQWRAWQAGPGRWGTITDLNSASIGIELDNDGATPFAQPQ 135

Query: 130 YQALTELTQALMVRYPHITLPRITGHQYIAPLRKTDPGLVFDWRRFRA 177
              L  L   L  R   I   +I GH+ +AP RK DPG +F W++  A
Sbjct: 136 IDGLLRLLADLTTRL-RIPPTQIIGHEDLAPGRKDDPGPLFPWQQLAA 182