Pairwise Alignments

Query, 181 a.a., 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD from Vibrio cholerae E7946 ATCC 55056

Subject, 257 a.a., N-acetylmuramoyl-L-alanine amidase from Pseudomonas simiae WCS417

 Score = 69.3 bits (168), Expect = 5e-17
 Identities = 57/167 (34%), Positives = 76/167 (45%), Gaps = 23/167 (13%)

Query: 31  LVVHNISLPPGQFG---GPYIEQFFLGELDANQHSFFKVIAKMRVSAHCVIR-------R 80
           ++V + S P   F    G  + Q  L    A   S  + + +  VSAH ++        R
Sbjct: 1   MLVIDTSFPAKGFNERNGEPVRQVILHYTAAPFASSLRTLTQDGVSAHYLLPDPDDPRYR 60

Query: 81  DGEVVQFVPFHL-----RAWHAGVSSFAGRAKCNDYSIGIEL------EGSDFV--PYTD 127
           D    +   F L     RAWHAGVS +AGR   N  SIGIE+      +G  F    Y +
Sbjct: 61  DAGYEELRVFRLVEEDKRAWHAGVSHWAGRDNLNSRSIGIEIVNLARDDGGVFTFPAYGE 120

Query: 128 AQYQALTELTQALMVRYPHITLPRITGHQYIAPLRKTDPGLVFDWRR 174
            Q Q L  L + ++ RYP I    I GH  +A  RK+DPG    WRR
Sbjct: 121 EQTQVLIALVRDILGRYPQIGPTDILGHSDVAFSRKSDPGPCLPWRR 167