Pairwise Alignments

Query, 181 a.a., 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD from Vibrio cholerae E7946 ATCC 55056

Subject, 276 a.a., N-acetylmuramoyl-L-alanine amidase from Pseudomonas simiae WCS417

 Score = 77.8 bits (190), Expect = 2e-19
 Identities = 43/99 (43%), Positives = 56/99 (56%), Gaps = 10/99 (10%)

Query: 84  VVQFVPFHLRAWHAGVSSFAGRAKCNDYSIGIELEGSDFV---------PYTDAQYQALT 134
           V+Q VP   RAWHAGVS +  RA  ND SIGIE+  + F+         PYT+AQ   + 
Sbjct: 87  VLQLVPEAKRAWHAGVSHWGNRANLNDTSIGIEIVNAGFIEGPTGRLWFPYTEAQLALVK 146

Query: 135 ELTQALMVRYPHITLPRITGHQYIAPLRKTDPGLVFDWR 173
            L   ++ RY  I    + GH  IAP RK+DPG +F W+
Sbjct: 147 HLAADVIKRYA-IEPQNVVGHSDIAPFRKSDPGPLFPWQ 184